Zinc in PDB 7fbg: Kinetic and Structural Analysis By Peptidoglycan Editing Factor From Bacillus Cereus Atcc 14579

The structure of Kinetic and Structural Analysis By Peptidoglycan Editing Factor From Bacillus Cereus Atcc 14579, PDB code: 7fbg was solved by J.Seok, K.-J.Kim, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	27.12 / 1.60
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	58.133, 75.141, 51.805, 90, 90, 90
R / Rfree (%)	17.9 / 21.5

The structure of Kinetic and Structural Analysis By Peptidoglycan Editing Factor From Bacillus Cereus Atcc 14579 also contains other interesting chemical elements:

Calcium

(Ca)

1 atom

The binding sites of Zinc atom in the Kinetic and Structural Analysis By Peptidoglycan Editing Factor From Bacillus Cereus Atcc 14579 (pdb code 7fbg). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Kinetic and Structural Analysis By Peptidoglycan Editing Factor From Bacillus Cereus Atcc 14579, PDB code: 7fbg:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Kinetic and Structural Analysis By Peptidoglycan Editing Factor From Bacillus Cereus Atcc 14579


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Kinetic and Structural Analysis By Peptidoglycan Editing Factor From Bacillus Cereus Atcc 14579 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn302 b:30.0 occ:1.00 NE2 A:HIS80 2.1 24.6 1.0 SG A:CYS125 2.2 18.7 1.0 CE1 A:HIS142 2.3 17.9 1.0 NE2 A:HIS142 2.6 19.9 1.0 CE1 A:HIS80 2.9 24.1 1.0 CD2 A:HIS80 3.1 21.8 1.0 CB A:CYS125 3.3 15.1 1.0 ND1 A:HIS142 3.6 21.4 1.0 CD2 A:HIS142 3.9 16.2 1.0 ND1 A:HIS80 4.0 24.1 1.0 CG A:HIS80 4.1 19.6 1.0 CG A:HIS142 4.4 17.4 1.0 CA A:CYS125 4.6 15.1 1.0 CA A:GLY144 4.7 15.0 1.0 N A:GLY144 4.8 16.2 1.0 O A:HOH446 4.9 18.9 1.0 N A:CYS125 4.9 14.7 1.0

Zinc binding site 2 out of 2 in the Kinetic and Structural Analysis By Peptidoglycan Editing Factor From Bacillus Cereus Atcc 14579


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Kinetic and Structural Analysis By Peptidoglycan Editing Factor From Bacillus Cereus Atcc 14579 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn303 b:30.0 occ:1.00 SG A:CYS181 2.0 16.6 1.0 SG A:CYS242 2.3 16.5 1.0 SG A:CYS239 2.4 14.7 1.0 SG A:CYS182 2.8 17.4 1.0 CB A:CYS239 3.1 15.0 1.0 CB A:CYS181 3.2 17.3 1.0 CB A:CYS242 3.5 16.2 1.0 CB A:CYS182 3.8 15.5 1.0 N A:CYS182 3.9 17.8 1.0 N A:CYS242 4.0 14.3 1.0 C A:CYS181 4.1 20.9 1.0 CA A:CYS181 4.2 17.6 1.0 CA A:CYS242 4.3 14.9 1.0 CA A:CYS182 4.5 18.1 1.0 N A:CYS181 4.5 18.0 1.0 N A:GLY179 4.5 14.4 1.0 CA A:CYS239 4.6 14.4 1.0 CA A:GLY179 4.7 14.1 1.0 O A:GLY179 4.8 14.8 1.0 O A:CYS181 4.9 19.1 1.0 C A:GLY179 4.9 16.3 1.0 CB A:SER241 4.9 16.8 1.0 C A:SER241 5.0 14.2 1.0

J.Seok, K.-J.Kim. Kinetic and Structural Analysis By Peptidoglycan Editing Factor From Bacillus Cereus Atcc 14579 To Be Published.