Zinc in PDB 7eju: Junin Virus(Junv) Rna Polymerase L Complexed with Z Protein

Enzymatic activity of Junin Virus(Junv) Rna Polymerase L Complexed with Z Protein

All present enzymatic activity of Junin Virus(Junv) Rna Polymerase L Complexed with Z Protein:
2.7.7.48;

Other elements in 7eju:

The structure of Junin Virus(Junv) Rna Polymerase L Complexed with Z Protein also contains other interesting chemical elements:

Magnesium (Mg) 1 atom

Zinc Binding Sites:

The binding sites of Zinc atom in the Junin Virus(Junv) Rna Polymerase L Complexed with Z Protein (pdb code 7eju). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Junin Virus(Junv) Rna Polymerase L Complexed with Z Protein, PDB code: 7eju:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 7eju

Go back to Zinc Binding Sites List in 7eju
Zinc binding site 1 out of 2 in the Junin Virus(Junv) Rna Polymerase L Complexed with Z Protein


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Junin Virus(Junv) Rna Polymerase L Complexed with Z Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn2301

b:49.2
occ:1.00
ND1 A:HIS471 2.5 30.9 1.0
SG A:CYS287 2.5 23.8 1.0
SG A:CYS284 2.5 17.7 1.0
CG A:HIS471 3.2 30.9 1.0
CB A:HIS471 3.3 30.9 1.0
CE1 A:HIS471 3.5 30.9 1.0
CB A:CYS287 3.8 23.8 1.0
CB A:CYS284 3.8 17.7 1.0
SG A:CYS469 3.9 56.5 1.0
CA A:CYS469 4.1 56.5 1.0
N A:HIS471 4.1 30.9 1.0
N A:CYS287 4.2 23.8 1.0
CA A:HIS471 4.3 30.9 1.0
CD2 A:HIS471 4.3 30.9 1.0
CB A:CYS469 4.4 56.5 1.0
NE2 A:HIS471 4.5 30.9 1.0
CA A:CYS287 4.5 23.8 1.0
C A:CYS469 4.7 56.5 1.0
N A:ARG470 4.7 44.7 1.0
O A:HIS471 4.8 30.9 1.0
O A:ILE468 4.9 60.0 1.0
CB A:PHE286 4.9 17.1 1.0

Zinc binding site 2 out of 2 in 7eju

Go back to Zinc Binding Sites List in 7eju
Zinc binding site 2 out of 2 in the Junin Virus(Junv) Rna Polymerase L Complexed with Z Protein


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Junin Virus(Junv) Rna Polymerase L Complexed with Z Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn101

b:89.3
occ:1.00
SG B:CYS42 2.4 28.9 1.0
SG B:CYS61 2.5 48.2 1.0
SG B:CYS39 2.5 31.2 1.0
CB B:CYS58 2.7 48.6 1.0
CB B:CYS61 3.4 48.2 1.0
N B:CYS58 3.8 48.6 1.0
CA B:CYS58 3.8 48.6 1.0
CB B:CYS42 3.8 28.9 1.0
SG B:CYS58 3.9 48.6 1.0
N B:CYS42 3.9 28.9 1.0
CB B:CYS39 4.0 31.2 1.0
O B:CYS42 4.3 28.9 1.0
CB B:ALA45 4.4 31.1 1.0
CB B:CYS41 4.4 27.7 1.0
CA B:CYS42 4.4 28.9 1.0
N B:CYS61 4.5 48.2 1.0
CA B:CYS61 4.6 48.2 1.0
C B:CYS58 4.6 48.6 1.0
C B:CYS42 4.8 28.9 1.0
O B:CYS58 4.9 48.6 1.0
SG B:CYS41 4.9 27.7 1.0
C B:CYS41 5.0 27.7 1.0

Reference:

Y.Chen, Y.Chen. N/A N/A.
Page generated: Mon Jul 12 17:03:38 2021

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