Zinc in PDB 7duc: Crystal Structure of Cyto Walk

All present enzymatic activity of Crystal Structure of Cyto Walk:
2.7.13.3;

The structure of Crystal Structure of Cyto Walk, PDB code: 7duc was solved by W.Huang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	30.10 / 2.56
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	53.725, 60.201, 81.306, 90, 90, 90
R / Rfree (%)	19.5 / 24

The binding sites of Zinc atom in the Crystal Structure of Cyto Walk (pdb code 7duc). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of Cyto Walk, PDB code: 7duc:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Crystal Structure of Cyto Walk


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Cyto Walk within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn401 b:37.1 occ:1.00 OD1 A:ASP274 2.0 32.2 1.0 ND1 A:HIS364 2.2 34.0 1.0 ND1 A:HIS271 2.3 39.6 1.0 OE1 A:GLU368 2.4 36.9 1.0 OE2 A:GLU368 2.4 62.1 1.0 CG A:ASP274 2.6 30.6 1.0 OD2 A:ASP274 2.6 28.1 1.0 CD A:GLU368 2.7 45.3 1.0 CE1 A:HIS364 3.1 34.5 1.0 CE1 A:HIS271 3.1 34.7 1.0 CG A:HIS364 3.2 29.2 1.0 CG A:HIS271 3.3 28.9 1.0 CB A:HIS364 3.6 28.7 1.0 O A:HOH516 3.6 30.9 1.0 CB A:HIS271 3.7 33.3 1.0 CA A:HIS364 3.8 31.1 1.0 CB A:ASP274 4.0 28.5 1.0 NE2 A:HIS364 4.2 33.0 1.0 CG A:GLU368 4.3 58.5 1.0 NE2 A:HIS271 4.3 39.9 1.0 CD2 A:HIS364 4.3 31.2 1.0 N A:HIS271 4.3 37.5 1.0 CD2 A:HIS271 4.4 35.1 1.0 CA A:HIS271 4.6 30.5 1.0 CA A:ASP274 4.7 34.9 1.0 N A:HIS364 4.8 30.3 1.0 O A:LEU363 4.8 29.7 1.0 C A:HIS364 4.9 35.6 1.0 N A:ASP274 4.9 29.9 1.0 CB A:GLU368 5.0 50.2 1.0 OG A:SER273 5.0 46.5 1.0

Zinc binding site 2 out of 2 in the Crystal Structure of Cyto Walk


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of Cyto Walk within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn401 b:27.3 occ:1.00 OD1 B:ASP274 2.1 30.9 1.0 ND1 B:HIS364 2.3 29.3 1.0 ND1 B:HIS271 2.3 20.8 1.0 OE1 B:GLU368 2.3 39.5 1.0 OE2 B:GLU368 2.3 40.1 1.0 OD2 B:ASP274 2.4 33.6 1.0 CG B:ASP274 2.6 26.9 1.0 CD B:GLU368 2.6 32.8 1.0 CE1 B:HIS364 3.1 28.1 1.0 CE1 B:HIS271 3.2 30.4 1.0 CG B:HIS271 3.3 21.2 1.0 CG B:HIS364 3.3 31.6 1.0 CB B:HIS271 3.6 23.2 1.0 CB B:HIS364 3.7 23.2 1.0 O B:HOH509 3.7 29.1 1.0 CA B:HIS364 3.9 26.9 1.0 CB B:ASP274 4.1 28.7 1.0 CG B:GLU368 4.1 31.3 1.0 N B:HIS271 4.1 18.1 1.0 NE2 B:HIS364 4.3 30.0 1.0 NE2 B:HIS271 4.3 24.1 1.0 CD2 B:HIS364 4.4 26.2 1.0 CD2 B:HIS271 4.4 22.3 1.0 CA B:HIS271 4.4 19.5 1.0 CE A:MET272 4.6 48.8 1.0 NH2 B:ARG343 4.7 31.9 1.0 SD A:MET272 4.7 53.0 1.0 CA B:ASP274 4.8 28.7 1.0 CB B:GLU368 4.9 40.1 1.0 N B:HIS364 4.9 27.6 1.0 O B:HIS271 5.0 29.3 1.0 C B:HIS364 5.0 27.1 1.0 C B:THR270 5.0 28.4 1.0

W.Huang, W.Huang. N/A N/A.