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Zinc in PDB 7dsf: The Crystal Structure of Human Spr From Biortus.

Enzymatic activity of The Crystal Structure of Human Spr From Biortus.

All present enzymatic activity of The Crystal Structure of Human Spr From Biortus.:
1.1.1.153;

Protein crystallography data

The structure of The Crystal Structure of Human Spr From Biortus., PDB code: 7dsf was solved by F.Wang, Z.Lv, W.Cheng, D.Lin, Q.Meng, B.Zhang, Y.Huang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.07 / 1.80
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 55.893, 74.56, 121.176, 90, 90, 90
R / Rfree (%) 19.4 / 21.8

Zinc Binding Sites:

The binding sites of Zinc atom in the The Crystal Structure of Human Spr From Biortus. (pdb code 7dsf). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the The Crystal Structure of Human Spr From Biortus., PDB code: 7dsf:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 7dsf

Go back to Zinc Binding Sites List in 7dsf
Zinc binding site 1 out of 2 in the The Crystal Structure of Human Spr From Biortus.


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of The Crystal Structure of Human Spr From Biortus. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn303

b:23.3
occ:1.00
OD1 A:ASP260 1.9 22.9 1.0
OD2 A:ASP257 2.0 21.8 1.0
CG A:ASP257 2.6 21.3 1.0
OD1 A:ASP257 2.7 21.4 1.0
CG A:ASP260 2.8 24.2 1.0
OD2 A:ASP260 3.1 23.0 1.0
O A:HOH423 3.8 39.0 1.0
O A:HOH448 4.0 39.5 1.0
CB A:ASP257 4.1 21.0 1.0
CB A:ASP260 4.2 24.4 1.0
N A:ASP260 4.4 24.6 1.0
CA A:ASP260 4.5 25.2 1.0
N A:ASP257 4.8 20.2 1.0
C A:TYR259 4.8 24.7 1.0
CB A:TYR259 4.8 24.4 1.0
CA A:ASP257 4.9 20.6 1.0

Zinc binding site 2 out of 2 in 7dsf

Go back to Zinc Binding Sites List in 7dsf
Zinc binding site 2 out of 2 in the The Crystal Structure of Human Spr From Biortus.


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of The Crystal Structure of Human Spr From Biortus. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn303

b:23.7
occ:1.00
OD1 B:ASP260 1.9 22.0 1.0
OD2 B:ASP257 2.0 19.4 1.0
CG B:ASP257 2.7 18.3 1.0
OD1 B:ASP257 2.7 18.1 1.0
CG B:ASP260 2.9 21.9 1.0
OD2 B:ASP260 3.1 22.8 1.0
O B:HOH483 4.0 39.4 1.0
CB B:ASP257 4.1 18.3 1.0
CB B:ASP260 4.2 21.6 1.0
N B:ASP260 4.4 19.8 1.0
CB B:TYR259 4.6 17.6 1.0
CA B:ASP260 4.6 21.2 1.0
O B:HOH532 4.6 35.0 1.0
C B:TYR259 4.7 18.7 1.0

Reference:

F.Wang, Z.Lv, W.Cheng, D.Lin, Q.Meng, B.Zhang, Y.Huang. The Crystal Structure of Human Spr From Biortus. To Be Published.
Page generated: Tue Oct 29 19:15:28 2024

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