Zinc in PDB 7diq: Structure of PFGRX1 with Zinc

All present enzymatic activity of Structure of PFGRX1 with Zinc:
1.8.4.2;

The structure of Structure of PFGRX1 with Zinc, PDB code: 7diq was solved by Y.Manickam, A.Sharma, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	24.23 / 1.87
Space group	P 32 2 1
Cell size a, b, c (Å), α, β, γ (°)	48.466, 48.466, 82.417, 90, 90, 120
R / Rfree (%)	15.3 / 20.1

The binding sites of Zinc atom in the Structure of PFGRX1 with Zinc (pdb code 7diq). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 3 binding sites of Zinc where determined in the Structure of PFGRX1 with Zinc, PDB code: 7diq:
Jump to Zinc binding site number: 1; 2; 3;

Zinc binding site 1 out of 3 in the Structure of PFGRX1 with Zinc


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of PFGRX1 with Zinc within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn203 b:21.0 occ:0.51 OE1 A:GLU51 1.9 24.0 1.0 O A:HOH354 2.0 29.0 1.0 O A:HOH374 2.0 24.0 0.5 NE2 A:HIS49 2.1 30.0 1.0 O A:HOH334 2.3 37.7 0.8 O A:HOH381 2.4 41.4 0.9 CE1 A:HIS49 2.9 34.5 1.0 CD A:GLU51 2.9 26.9 1.0 CD2 A:HIS49 3.3 29.1 1.0 OE2 A:GLU51 3.3 22.1 1.0 ND1 A:HIS49 4.1 30.7 1.0 CG A:GLU51 4.3 20.7 1.0 O A:HOH341 4.3 34.0 1.0 CG A:HIS49 4.3 26.3 1.0 O A:VAL50 4.4 16.4 1.0 CB A:GLU51 4.5 16.3 1.0 CA A:GLU51 4.7 13.3 1.0

Zinc binding site 2 out of 3 in the Structure of PFGRX1 with Zinc


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Structure of PFGRX1 with Zinc within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn204 b:44.7 occ:0.47 O A:HOH305 1.9 35.7 0.6 OE2 A:GLU54 2.3 33.3 1.0 OE1 A:GLU54 2.7 27.5 1.0 CD A:GLU54 2.8 29.1 1.0 O A:HOH305 3.1 32.8 0.4 CE A:LYS26 4.1 57.1 1.0 O A:THR27 4.3 23.4 1.0 CG A:GLU54 4.3 21.9 1.0 NZ A:LYS26 4.9 62.2 1.0 CB A:THR27 4.9 26.0 1.0

Zinc binding site 3 out of 3 in the Structure of PFGRX1 with Zinc


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 3 of Structure of PFGRX1 with Zinc within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn205 b:47.6 occ:0.37 OE1 A:GLU28 2.0 47.1 1.0 O A:HOH386 2.7 50.6 0.9 CD A:GLU28 2.8 39.6 1.0 OE2 A:GLU28 3.0 34.8 1.0 CG A:GLU28 4.2 31.5 1.0

Y.Manickam, A.Sharma. Interaction of Metals with PFGRX1 To Be Published.