Zinc in PDB 7ckl: Structure of Lassa Virus Polymerase Bound to Z Matrix Protein

All present enzymatic activity of Structure of Lassa Virus Polymerase Bound to Z Matrix Protein:
2.7.7.48;

The structure of Structure of Lassa Virus Polymerase Bound to Z Matrix Protein also contains other interesting chemical elements:

Manganese

(Mn)

1 atom

The binding sites of Zinc atom in the Structure of Lassa Virus Polymerase Bound to Z Matrix Protein (pdb code 7ckl). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Structure of Lassa Virus Polymerase Bound to Z Matrix Protein, PDB code: 7ckl:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Structure of Lassa Virus Polymerase Bound to Z Matrix Protein


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of Lassa Virus Polymerase Bound to Z Matrix Protein within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn101 b:160.0 occ:1.00 SG B:CYS31 2.4 125.9 1.0 SG B:CYS50 2.4 158.1 1.0 SG B:CYS53 2.4 152.3 1.0 SG B:CYS34 2.4 113.5 1.0 CB B:CYS31 3.1 125.9 1.0 OG B:SER33 3.2 109.9 1.0 CB B:CYS34 3.3 113.5 1.0 CB B:CYS53 3.5 152.3 1.0 CB B:CYS50 3.6 158.1 1.0 N B:CYS34 3.7 113.5 1.0 CA B:CYS34 4.1 113.5 1.0 N B:CYS50 4.3 158.1 1.0 CB B:GLU37 4.5 135.8 1.0 CB B:SER33 4.5 109.9 1.0 CA B:CYS31 4.5 125.9 1.0 N B:CYS53 4.5 152.3 1.0 CA B:CYS53 4.6 152.3 1.0 CA B:CYS50 4.6 158.1 1.0 O B:CYS31 4.7 125.9 1.0 C B:SER33 4.7 109.9 1.0 C B:CYS31 4.8 125.9 1.0 N B:SER33 4.9 109.9 1.0 C B:CYS34 4.9 113.5 1.0 CA B:SER33 4.9 109.9 1.0

Zinc binding site 2 out of 2 in the Structure of Lassa Virus Polymerase Bound to Z Matrix Protein


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Structure of Lassa Virus Polymerase Bound to Z Matrix Protein within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn102 b:239.0 occ:1.00 NE2 B:HIS47 2.3 152.6 1.0 SG B:CYS67 2.4 176.9 1.0 SG B:CYS44 2.4 171.9 1.0 SG B:CYS64 2.4 165.7 1.0 CD2 B:HIS47 2.5 152.6 1.0 CB B:CYS44 3.2 171.9 1.0 CE1 B:HIS47 3.6 152.6 1.0 CG B:HIS47 3.8 152.6 1.0 CD2 B:LEU49 3.9 150.8 1.0 CB B:CYS64 3.9 165.7 1.0 CB B:CYS67 3.9 176.9 1.0 OD1 B:ASN45 4.2 175.2 1.0 OD1 B:ASN46 4.3 168.6 1.0 ND1 B:HIS47 4.3 152.6 1.0 N B:CYS67 4.4 176.9 1.0 CA B:CYS44 4.7 171.9 1.0 CD2 B:LEU71 4.8 151.7 1.0 CA B:CYS67 4.8 176.9 1.0 CB B:ILE66 4.8 162.1 1.0 N B:ASN45 4.9 175.2 1.0

X.Xu, R.Peng, Q.Peng, Y.Shi. Structure of Lassa Virus Polymerase Bound to Z Matrix Protein To Be Published.