Zinc in PDB 7a92: Dissociated S1 Domain of Sars-Cov-2 Spike Bound to ACE2 (Unmasked Refinement)

All present enzymatic activity of Dissociated S1 Domain of Sars-Cov-2 Spike Bound to ACE2 (Unmasked Refinement):
3.4.17.23;

The binding sites of Zinc atom in the Dissociated S1 Domain of Sars-Cov-2 Spike Bound to ACE2 (Unmasked Refinement) (pdb code 7a92). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Dissociated S1 Domain of Sars-Cov-2 Spike Bound to ACE2 (Unmasked Refinement), PDB code: 7a92:

Zinc binding site 1 out of 1 in the Dissociated S1 Domain of Sars-Cov-2 Spike Bound to ACE2 (Unmasked Refinement)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Dissociated S1 Domain of Sars-Cov-2 Spike Bound to ACE2 (Unmasked Refinement) within 5.0Å range: probe atom residue distance (Å) B Occ D:Zn706 b:83.2 occ:1.00 NE2 D:HIS374 2.3 13.1 1.0 NE2 D:HIS378 2.3 16.9 1.0 OE1 D:GLU402 2.5 17.1 1.0 CE1 D:HIS374 2.7 13.1 1.0 CD2 D:HIS378 2.9 16.9 1.0 OE2 D:GLU402 3.1 17.1 1.0 CD D:GLU402 3.1 17.1 1.0 CD2 D:HIS374 3.4 13.1 1.0 CE1 D:HIS378 3.5 16.9 1.0 ND1 D:HIS374 3.8 13.1 1.0 CG D:HIS374 4.1 13.1 1.0 CG D:HIS378 4.2 16.9 1.0 OE1 D:GLU375 4.4 15.3 1.0 ND1 D:HIS378 4.4 16.9 1.0 CG D:GLU402 4.5 17.1 1.0 OE2 D:GLU375 4.7 15.3 1.0 CD D:GLU375 4.8 15.3 1.0

D.J.Benton, A.G.Wrobel, P.Xu, C.Roustan, S.R.Martin, P.B.Rosenthal, J.J.Skehel, S.J.Gamblin. Receptor Binding and Priming of the Spike Protein of Sars-Cov-2 For Membrane Fusion. Nature 2020.
ISSN: ESSN 1476-4687
PubMed: 32942285
DOI: 10.1038/S41586-020-2772-0