Zinc in PDB 6zok: Sars-Cov-2-NSP1-40S Complex, Focused on Body

All present enzymatic activity of Sars-Cov-2-NSP1-40S Complex, Focused on Body:
2.7.7.48; 3.4.19.12; 3.4.22.69; 3.6.4.12; 3.6.4.13;

The structure of Sars-Cov-2-NSP1-40S Complex, Focused on Body also contains other interesting chemical elements:

Magnesium

(Mg)

109 atoms

The binding sites of Zinc atom in the Sars-Cov-2-NSP1-40S Complex, Focused on Body (pdb code 6zok). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Sars-Cov-2-NSP1-40S Complex, Focused on Body, PDB code: 6zok:

Zinc binding site 1 out of 1 in the Sars-Cov-2-NSP1-40S Complex, Focused on Body


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Sars-Cov-2-NSP1-40S Complex, Focused on Body within 5.0Å range: probe atom residue distance (Å) B Occ a:Zn201 b:37.8 occ:1.00 SG a:CYS77 2.3 8.6 1.0 SG a:CYS26 2.3 8.9 1.0 SG a:CYS74 2.3 8.2 1.0 SG a:CYS23 2.4 7.8 1.0 CB a:CYS77 3.1 8.6 1.0 CB a:CYS23 3.3 7.8 1.0 CB a:CYS26 3.5 8.9 1.0 CB a:CYS74 3.7 8.2 1.0 N a:CYS26 3.8 8.9 1.0 N a:CYS74 4.2 8.2 1.0 CA a:CYS26 4.2 8.9 1.0 N a:CYS77 4.3 8.6 1.0 CA a:CYS77 4.3 8.6 1.0 CB a:ASN25 4.3 8.6 1.0 CA a:CYS74 4.5 8.2 1.0 CB a:ARG28 4.7 7.1 1.0 CA a:CYS23 4.8 7.8 1.0 C a:ASN25 4.8 8.6 1.0 C a:CYS26 4.9 8.9 1.0 CA a:ASN25 4.9 8.6 1.0 N a:ASN25 4.9 8.6 1.0

K.Schubert, E.D.Karousis, A.Jomaa, A.Scaiola, B.Echeverria, L.A.Gurzeler, M.Leibundgut, V.Thiel, O.Muhlemann, N.Ban. Sars-Cov-2 NSP1 Binds the Ribosomal Mrna Channel to Inhibit Translation. Nat.Struct.Mol.Biol. V. 27 959 2020.
ISSN: ESSN 1545-9985
PubMed: 32908316
DOI: 10.1038/S41594-020-0511-8