Atomistry » Zinc » PDB 6zke-6zpe » 6zkp
Atomistry »
  Zinc »
    PDB 6zke-6zpe »
      6zkp »

Zinc in PDB 6zkp: Native Complex I, OPEN1

Enzymatic activity of Native Complex I, OPEN1

All present enzymatic activity of Native Complex I, OPEN1:
1.6.99.3; 7.1.1.2;

Other elements in 6zkp:

The structure of Native Complex I, OPEN1 also contains other interesting chemical elements:

Potassium (K) 1 atom
Iron (Fe) 28 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Native Complex I, OPEN1 (pdb code 6zkp). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Native Complex I, OPEN1, PDB code: 6zkp:

Zinc binding site 1 out of 1 in 6zkp

Go back to Zinc Binding Sites List in 6zkp
Zinc binding site 1 out of 1 in the Native Complex I, OPEN1


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Native Complex I, OPEN1 within 5.0Å range:
probe atom residue distance (Å) B Occ
b:Zn300

b:26.1
occ:1.00
NE2 b:HIS68 2.0 43.1 1.0
SG b:CYS87 2.3 24.7 1.0
SG b:CYS84 2.3 19.4 1.0
SG b:CYS59 2.3 28.6 1.0
CE1 b:HIS68 2.9 41.8 1.0
CD2 b:HIS68 3.0 32.2 1.0
CB b:CYS84 3.3 20.9 1.0
CB b:CYS59 3.3 15.1 1.0
CB b:CYS87 3.4 21.8 1.0
N b:GLY61 3.6 31.3 1.0
N b:CYS87 3.8 18.9 1.0
CA b:GLY61 3.9 29.6 1.0
ND1 b:HIS68 4.0 39.2 1.0
CG b:HIS68 4.1 30.1 1.0
C b:CYS59 4.2 22.8 1.0
CA b:CYS87 4.2 19.0 1.0
C b:ASP60 4.4 29.1 1.0
CA b:CYS59 4.4 19.8 1.0
O b:CYS59 4.4 31.8 1.0
N b:ASP60 4.4 23.8 1.0
CB b:TYR86 4.6 20.9 1.0
CA b:ASP60 4.7 25.4 1.0
CA b:CYS84 4.7 23.1 1.0
CG2 b:VAL71 4.9 10.4 1.0
C b:TYR86 4.9 15.0 1.0
C b:CYS87 5.0 18.7 1.0

Reference:

D.Kampjut, L.A.Sazanov. The Coupling Mechanism of Mammalian Respiratory Complex I. Science V. 370 2020.
ISSN: ESSN 1095-9203
PubMed: 32972993
DOI: 10.1126/SCIENCE.ABC4209
Page generated: Tue Oct 29 15:46:00 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy