Zinc in PDB 6wnz: Structure of A Dimer of the Sulfolobus Solfataricus Mcm N-Terminal Domain Reveals Potential Role in Mcm Ring Opening

Enzymatic activity of Structure of A Dimer of the Sulfolobus Solfataricus Mcm N-Terminal Domain Reveals Potential Role in Mcm Ring Opening

All present enzymatic activity of Structure of A Dimer of the Sulfolobus Solfataricus Mcm N-Terminal Domain Reveals Potential Role in Mcm Ring Opening:
3.6.4.12;

Protein crystallography data

The structure of Structure of A Dimer of the Sulfolobus Solfataricus Mcm N-Terminal Domain Reveals Potential Role in Mcm Ring Opening, PDB code: 6wnz was solved by M.Meagher, M.N.Spence, E.J.Enemark, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.00
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 55.227, 102.448, 128.178, 90, 90, 90
R / Rfree (%) 23.3 / 25.5

Zinc Binding Sites:

The binding sites of Zinc atom in the Structure of A Dimer of the Sulfolobus Solfataricus Mcm N-Terminal Domain Reveals Potential Role in Mcm Ring Opening (pdb code 6wnz). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Structure of A Dimer of the Sulfolobus Solfataricus Mcm N-Terminal Domain Reveals Potential Role in Mcm Ring Opening, PDB code: 6wnz:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 6wnz

Go back to Zinc Binding Sites List in 6wnz
Zinc binding site 1 out of 2 in the Structure of A Dimer of the Sulfolobus Solfataricus Mcm N-Terminal Domain Reveals Potential Role in Mcm Ring Opening


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of A Dimer of the Sulfolobus Solfataricus Mcm N-Terminal Domain Reveals Potential Role in Mcm Ring Opening within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn301

b:58.2
occ:1.00
ND1 B:HIS144 2.1 48.4 1.0
SG B:CYS149 2.3 61.9 1.0
SG B:CYS174 2.3 61.0 1.0
SG B:CYS171 2.3 58.9 1.0
CG B:HIS144 3.0 61.5 1.0
CE1 B:HIS144 3.1 54.3 1.0
CB B:CYS171 3.3 59.4 1.0
CB B:HIS144 3.3 51.8 1.0
CB B:CYS149 3.3 62.0 1.0
CB B:CYS174 3.4 55.0 1.0
N B:CYS174 3.9 65.7 1.0
CD2 B:HIS144 4.1 62.3 1.0
NE2 B:HIS144 4.1 59.5 1.0
CA B:CYS174 4.2 66.3 1.0
CB B:LYS173 4.6 60.6 1.0
CA B:CYS171 4.7 55.3 1.0
CA B:CYS149 4.7 65.9 1.0
CA B:HIS144 4.8 52.0 1.0
C B:LYS173 4.8 62.9 1.0
O B:LYS176 4.9 66.1 1.0
C B:CYS174 5.0 61.2 1.0

Zinc binding site 2 out of 2 in 6wnz

Go back to Zinc Binding Sites List in 6wnz
Zinc binding site 2 out of 2 in the Structure of A Dimer of the Sulfolobus Solfataricus Mcm N-Terminal Domain Reveals Potential Role in Mcm Ring Opening


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Structure of A Dimer of the Sulfolobus Solfataricus Mcm N-Terminal Domain Reveals Potential Role in Mcm Ring Opening within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn301

b:82.9
occ:1.00
ND1 A:HIS144 2.1 54.1 1.0
SG A:CYS149 2.3 89.2 1.0
SG A:CYS171 2.3 83.8 1.0
SG A:CYS174 2.3 103.3 1.0
CG A:HIS144 3.0 80.0 1.0
CE1 A:HIS144 3.1 66.5 1.0
CB A:HIS144 3.2 80.5 1.0
CB A:CYS171 3.3 79.3 1.0
CB A:CYS149 3.3 88.0 1.0
CB A:CYS174 3.4 93.6 1.0
N A:CYS174 3.9 99.9 1.0
CD2 A:HIS144 4.1 74.8 1.0
NE2 A:HIS144 4.1 66.1 1.0
CA A:CYS174 4.2 96.9 1.0
CB A:LYS173 4.6 96.5 1.0
CA A:CYS149 4.7 94.8 1.0
CA A:CYS171 4.7 76.4 1.0
CA A:HIS144 4.8 86.3 1.0
C A:LYS173 4.8 96.3 1.0
O A:LYS176 4.9 117.1 1.0
C A:CYS174 5.0 93.0 1.0

Reference:

M.Meagher, M.N.Spence, E.J.Enemark. Structure of A Dimer of the Sulfolobus Solfataricus Mcm N-Terminal Domain Reveals A Potential Role in Mcm Ring Opening Acta Crystallogr.,Sect.F V. 77 177 2021.
ISSN: ESSN 2053-230X
DOI: 10.1107/S2053230X21005331
Page generated: Mon Jul 12 16:39:49 2021

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy