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Zinc in PDB 6vdn: Hcv NS3/4A Protease A156T Mutant

Enzymatic activity of Hcv NS3/4A Protease A156T Mutant

All present enzymatic activity of Hcv NS3/4A Protease A156T Mutant:
2.7.7.48; 3.4.21.98; 3.6.1.15; 3.6.4.13;

Protein crystallography data

The structure of Hcv NS3/4A Protease A156T Mutant, PDB code: 6vdn was solved by J.Timm, C.A.Schiffer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.69 / 2.15
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 54.111, 58.741, 60.376, 90, 90, 90
R / Rfree (%) 19.9 / 23.4

Zinc Binding Sites:

The binding sites of Zinc atom in the Hcv NS3/4A Protease A156T Mutant (pdb code 6vdn). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Hcv NS3/4A Protease A156T Mutant, PDB code: 6vdn:

Zinc binding site 1 out of 1 in 6vdn

Go back to Zinc Binding Sites List in 6vdn
Zinc binding site 1 out of 1 in the Hcv NS3/4A Protease A156T Mutant


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Hcv NS3/4A Protease A156T Mutant within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1201

b:41.5
occ:1.00
SG A:CYS1097 2.2 34.2 1.0
ND1 A:HIS1149 2.3 38.4 1.0
SG A:CYS1099 2.5 44.5 1.0
HB2 A:HIS1149 2.5 38.6 1.0
SG A:CYS1145 2.6 40.4 1.0
HB3 A:CYS1145 2.8 42.6 1.0
HB2 A:CYS1145 2.8 42.6 1.0
CB A:CYS1145 2.9 35.3 1.0
HB2 A:CYS1099 3.0 38.3 1.0
CG A:HIS1149 3.1 40.6 1.0
HB2 A:CYS1097 3.1 43.9 1.0
H A:CYS1099 3.1 38.2 1.0
CB A:CYS1097 3.1 36.5 1.0
HA A:CYS1097 3.2 46.1 1.0
CB A:HIS1149 3.2 32.0 1.0
CE1 A:HIS1149 3.3 36.8 1.0
CB A:CYS1099 3.3 31.8 1.0
H A:THR1098 3.5 48.3 1.0
HE1 A:HIS1149 3.6 44.3 1.0
CA A:CYS1097 3.6 38.3 1.0
HB3 A:HIS1149 3.7 38.6 1.0
N A:CYS1099 3.8 31.7 1.0
HB3 A:ALA1147 3.9 41.8 1.0
H A:HIS1149 3.9 39.2 1.0
N A:THR1098 4.0 40.1 1.0
HB3 A:CYS1097 4.0 43.9 1.0
HB3 A:CYS1099 4.1 38.3 1.0
CA A:CYS1099 4.2 45.1 1.0
CD2 A:HIS1149 4.2 43.0 1.0
C A:CYS1097 4.2 34.0 1.0
H A:ALA1147 4.3 41.6 1.0
NE2 A:HIS1149 4.3 47.6 1.0
CA A:HIS1149 4.5 38.4 1.0
CA A:CYS1145 4.5 37.8 1.0
HD2 A:PRO1146 4.5 44.6 1.0
N A:HIS1149 4.6 32.5 1.0
HG22 A:THR1098 4.7 57.9 1.0
HG22 A:VAL1151 4.7 37.9 1.0
H A:CYS1145 4.8 36.1 1.0
CB A:ALA1147 4.8 34.7 1.0
HA A:CYS1099 4.8 54.4 1.0
HA A:CYS1145 4.9 45.5 1.0
C A:THR1098 4.9 45.9 1.0
N A:CYS1097 4.9 35.0 1.0
HG23 A:VAL1151 5.0 37.9 1.0
HB2 A:ALA1147 5.0 41.8 1.0

Reference:

J.Timm, J.Zephyr, S.Hou, N.Kurt Yilmaz, C.A.Schiffer. Apo Hcv Protease A156T To Be Published.
Page generated: Tue Oct 29 09:01:14 2024

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