Zinc in PDB 6v9i: Cryo-Em Structure of CULLIN5 Bound to Ring-Box Protein 2 (CUL5-RBX2)

The binding sites of Zinc atom in the Cryo-Em Structure of CULLIN5 Bound to Ring-Box Protein 2 (CUL5-RBX2) (pdb code 6v9i). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 3 binding sites of Zinc where determined in the Cryo-Em Structure of CULLIN5 Bound to Ring-Box Protein 2 (CUL5-RBX2), PDB code: 6v9i:
Jump to Zinc binding site number: 1; 2; 3;

Zinc binding site 1 out of 3 in the Cryo-Em Structure of CULLIN5 Bound to Ring-Box Protein 2 (CUL5-RBX2)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Cryo-Em Structure of CULLIN5 Bound to Ring-Box Protein 2 (CUL5-RBX2) within 5.0Å range: probe atom residue distance (Å) B Occ R:Zn201 b:57.7 occ:1.00 SG R:CYS53 1.8 20.0 1.0 SG R:CYS50 2.3 20.0 1.0 CB R:CYS50 2.5 20.0 1.0 SG R:CYS88 2.6 20.0 1.0 CB R:HIS85 2.8 20.0 1.0 N R:HIS85 3.5 20.0 1.0 CB R:CYS88 3.6 20.0 1.0 CB R:CYS53 3.6 20.0 1.0 CA R:HIS85 3.7 20.0 1.0 CA R:CYS50 4.0 20.0 1.0 CB R:CYS61 4.0 20.0 1.0 N R:CYS53 4.5 20.0 1.0 O R:HIS85 4.6 20.0 1.0 CA R:CYS53 4.6 20.0 1.0 C R:HIS85 4.6 20.0 1.0 C R:PHE84 4.7 20.0 1.0 N R:CYS50 4.7 20.0 1.0 N R:ARG54 4.9 20.0 1.0 CA R:CYS88 4.9 20.0 1.0 C R:CYS50 4.9 20.0 1.0 SG R:CYS61 4.9 20.0 1.0 N R:CYS88 4.9 20.0 1.0 O R:VAL55 4.9 20.0 1.0 CB R:PHE84 5.0 20.0 1.0

Zinc binding site 2 out of 3 in the Cryo-Em Structure of CULLIN5 Bound to Ring-Box Protein 2 (CUL5-RBX2)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Cryo-Em Structure of CULLIN5 Bound to Ring-Box Protein 2 (CUL5-RBX2) within 5.0Å range: probe atom residue distance (Å) B Occ R:Zn202 b:34.1 occ:1.00 SG R:CYS80 2.4 20.0 1.0 SG R:CYS99 2.4 20.0 1.0 CB R:CYS80 3.2 20.0 1.0 CB R:CYS99 3.2 20.0 1.0 CB R:HIS82 3.3 20.0 1.0 O R:CYS80 4.3 20.0 1.0 N R:CYS102 4.3 20.0 1.0 CA R:CYS80 4.5 20.0 1.0 CB R:CYS102 4.5 20.0 1.0 CA R:HIS82 4.5 20.0 1.0 C R:CYS80 4.5 20.0 1.0 N R:HIS82 4.5 20.0 1.0 CA R:CYS99 4.7 20.0 1.0 CB R:LEU101 4.7 20.0 1.0 SG R:CYS102 4.8 20.0 1.0

Zinc binding site 3 out of 3 in the Cryo-Em Structure of CULLIN5 Bound to Ring-Box Protein 2 (CUL5-RBX2)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 3 of Cryo-Em Structure of CULLIN5 Bound to Ring-Box Protein 2 (CUL5-RBX2) within 5.0Å range: probe atom residue distance (Å) B Occ R:Zn203 b:65.6 occ:1.00 SG R:CYS73 2.1 20.0 1.0 SG R:CYS64 2.4 20.0 1.0 SG R:CYS61 2.5 20.0 1.0 SG R:CYS87 2.8 20.0 1.0 CB R:CYS87 3.2 20.0 1.0 CB R:CYS73 3.4 20.0 1.0 CA R:CYS73 3.7 20.0 1.0 CB R:CYS64 4.0 20.0 1.0 N R:CYS73 4.1 20.0 1.0 N R:CYS64 4.1 20.0 1.0 CB R:CYS61 4.2 20.0 1.0 CB R:ARG63 4.4 20.0 1.0 CA R:CYS64 4.6 20.0 1.0 CA R:CYS87 4.7 20.0 1.0 N R:CYS61 4.9 20.0 1.0 C R:ARG63 4.9 20.0 1.0 O R:CYS61 4.9 20.0 1.0 CA R:CYS61 5.0 20.0 1.0

E.A.Komives, R.J.Lumpkin, R.W.Baker, A.E.Leschziner. Cryo-Em Structure of CULLIN5 Bound to Ring-Box Protein 2 (CUL5-RBX2) To Be Published.