Zinc in PDB 6v85: Parainfluenza Virus 5 L-P Complex

All present enzymatic activity of Parainfluenza Virus 5 L-P Complex:
2.1.1.296; 2.1.1.56; 2.7.7.48; 2.7.7.88;

The binding sites of Zinc atom in the Parainfluenza Virus 5 L-P Complex (pdb code 6v85). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Parainfluenza Virus 5 L-P Complex, PDB code: 6v85:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Parainfluenza Virus 5 L-P Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Parainfluenza Virus 5 L-P Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn3001 b:0.7 occ:1.00 NE2 A:HIS1368 1.8 75.0 1.0 CD2 A:HIS1368 2.7 75.0 1.0 CE1 A:HIS1368 2.8 75.0 1.0 O A:GLU1182 2.9 0.4 1.0 SG A:CYS1184 3.2 30.0 1.0 ND1 A:HIS1368 3.8 75.0 1.0 CG A:HIS1368 3.8 75.0 1.0 N A:CYS1184 4.0 30.0 1.0 SG A:CYS1181 4.0 0.6 1.0 ND1 A:HIS1366 4.0 75.0 1.0 C A:GLU1182 4.1 0.2 1.0 CA A:CYS1184 4.1 30.0 1.0 CB A:CYS1184 4.2 30.0 1.0 C A:GLN1183 4.3 30.0 1.0 CE1 A:HIS1366 4.5 75.0 1.0 O A:GLN1183 4.8 30.0 1.0 CG A:HIS1366 4.9 75.0 1.0 CA A:GLN1183 4.9 30.0 1.0 N A:GLN1183 5.0 30.0 1.0

Zinc binding site 2 out of 2 in the Parainfluenza Virus 5 L-P Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Parainfluenza Virus 5 L-P Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn3002 b:0.7 occ:1.00 SG A:CYS1136 2.4 75.1 1.0 SG A:CYS1373 2.5 0.7 1.0 N A:CYS1374 2.5 84.2 1.0 N A:CYS1373 2.8 0.7 1.0 CA A:CYS1373 3.0 0.7 1.0 C A:CYS1373 3.0 0.7 1.0 CB A:CYS1373 3.0 0.7 1.0 CB A:CYS1136 3.2 75.1 1.0 O A:CYS1374 3.5 0.9 1.0 SG A:CYS1374 3.6 0.4 1.0 CA A:CYS1374 3.7 1.0 1.0 C A:SER1372 3.7 75.1 1.0 OE2 A:GLU1168 3.9 52.3 1.0 C A:CYS1374 4.0 0.0 1.0 CD1 A:ILE1169 4.1 51.4 1.0 O A:CYS1373 4.1 0.7 1.0 CB A:CYS1374 4.2 0.5 1.0 OG A:SER1372 4.3 75.1 1.0 CA A:CYS1136 4.4 75.1 1.0 CA A:SER1372 4.4 75.1 1.0 O A:SER1372 4.6 75.1 1.0 CD A:GLU1168 4.8 52.3 1.0 O A:THR1135 4.9 90.0 1.0

R.Abdella, M.Aggarwal, T.Okura, R.A.Lamb, Y.He. Structure of A Paramyxovirus Polymerase Complex Reveals A Unique Methyltransferase-Ctd Conformation. Proc.Natl.Acad.Sci.Usa 2020.
ISSN: ESSN 1091-6490
DOI: 10.1073/PNAS.1919837117