Zinc in PDB 6v77: Crystal Structure of A Putative Hpce Protein From Mycobacterium Smegmatis

The structure of Crystal Structure of A Putative Hpce Protein From Mycobacterium Smegmatis, PDB code: 6v77 was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	45.93 / 1.75
Space group	P 32 2 1
Cell size a, b, c (Å), α, β, γ (°)	68.250, 68.250, 218.980, 90.00, 90.00, 120.00
R / Rfree (%)	16 / 20

The binding sites of Zinc atom in the Crystal Structure of A Putative Hpce Protein From Mycobacterium Smegmatis (pdb code 6v77). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of A Putative Hpce Protein From Mycobacterium Smegmatis, PDB code: 6v77:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Crystal Structure of A Putative Hpce Protein From Mycobacterium Smegmatis


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of A Putative Hpce Protein From Mycobacterium Smegmatis within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn301 b:41.9 occ:0.66 O A:HOH469 2.0 26.4 1.0 OE2 A:GLU123 2.1 25.6 1.0 OE1 A:GLU121 2.1 30.8 1.0 OD2 A:ASP152 2.2 24.6 1.0 O3 A:SO4303 2.6 82.3 0.8 O A:HOH403 3.0 48.4 1.0 CG A:ASP152 3.1 25.6 1.0 CD A:GLU123 3.2 29.4 1.0 CB A:ASP152 3.3 25.4 1.0 CD A:GLU121 3.3 36.5 1.0 OE1 A:GLU123 3.6 23.7 1.0 O A:VAL75 3.7 29.0 1.0 NZ A:LYS171 3.8 23.2 1.0 S A:SO4303 4.0 88.1 0.8 OE2 A:GLU121 4.0 32.8 1.0 OD1 A:ASP152 4.3 22.7 1.0 CB A:GLU121 4.3 21.8 1.0 CG A:GLU123 4.4 24.2 1.0 CG A:GLU121 4.4 23.6 1.0 O1 A:SO4303 4.5 90.6 0.8 CZ A:PHE97 4.5 29.5 1.0 CA A:GLY240 4.6 23.0 1.0 CG2 A:THR241 4.6 27.0 1.0 O4 A:SO4303 4.6 81.9 0.8 CB A:THR241 4.6 29.1 1.0 N A:THR241 4.7 24.6 1.0 C A:GLY240 4.7 26.5 1.0 CA A:ASP152 4.8 26.7 1.0 CE A:LYS171 4.8 26.4 1.0 C A:VAL75 4.8 26.7 1.0 O A:ASP152 4.9 21.7 1.0 O2 A:SO4303 4.9 90.3 0.8

Zinc binding site 2 out of 2 in the Crystal Structure of A Putative Hpce Protein From Mycobacterium Smegmatis


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of A Putative Hpce Protein From Mycobacterium Smegmatis within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn302 b:48.6 occ:0.60 O B:HOH419 2.1 27.6 1.0 OE2 B:GLU123 2.2 30.9 1.0 OE1 B:GLU121 2.2 28.2 1.0 OD2 B:ASP152 2.4 27.7 1.0 O B:HOH404 2.7 34.3 1.0 O3 B:SO4305 2.9 53.8 0.8 CG B:ASP152 3.3 25.3 1.0 CD B:GLU123 3.3 28.3 1.0 CB B:ASP152 3.4 27.1 1.0 CD B:GLU121 3.5 28.6 1.0 O B:VAL75 3.7 32.3 1.0 NZ B:LYS171 3.8 27.5 1.0 OE1 B:GLU123 3.8 26.1 1.0 OE2 B:GLU121 4.1 32.6 1.0 S B:SO4305 4.2 43.8 0.8 CB B:GLU121 4.4 24.3 1.0 OD1 B:ASP152 4.4 25.0 1.0 CZ B:PHE97 4.5 29.2 1.0 CG B:GLU123 4.5 25.8 1.0 N B:THR241 4.5 23.0 1.0 CG B:GLU121 4.5 24.8 1.0 O2 B:SO4305 4.5 38.4 0.8 CA B:GLY240 4.6 24.1 1.0 CG2 B:THR241 4.6 29.4 1.0 CB B:THR241 4.7 24.7 1.0 C B:VAL75 4.8 23.1 1.0 C B:GLY240 4.8 22.1 1.0 CE B:LYS171 4.9 27.0 1.0 CA B:ASP152 4.9 23.6 1.0 O B:ASP152 5.0 24.8 1.0

J.Abendroth, P.S.Horanyi, D.D.Lorimer, T.E.Edwards. Crystal Structure of A Putative Hpce Protein From Mycobacterium Smegmatis To Be Published.