Zinc in PDB 6uwa: Mouse Pkc C1B and C2 Domains

Enzymatic activity of Mouse Pkc C1B and C2 Domains

All present enzymatic activity of Mouse Pkc C1B and C2 Domains:
2.7.11.13;

Protein crystallography data

The structure of Mouse Pkc C1B and C2 Domains, PDB code: 6uwa was solved by A.Aggarwal, J.Mire, J.C.Sacchettini, T.Igumenova, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.39 / 1.20
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 34.041, 58.974, 104.954, 90.00, 90.00, 90.00
R / Rfree (%) 13.4 / 15.3

Other elements in 6uwa:

The structure of Mouse Pkc C1B and C2 Domains also contains other interesting chemical elements:

Lead (Pb) 4 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Mouse Pkc C1B and C2 Domains (pdb code 6uwa). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Mouse Pkc C1B and C2 Domains, PDB code: 6uwa:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 6uwa

Go back to Zinc Binding Sites List in 6uwa
Zinc binding site 1 out of 2 in the Mouse Pkc C1B and C2 Domains


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Mouse Pkc C1B and C2 Domains within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn310

b:7.0
occ:1.00
ND1 A:HIS140 2.1 7.3 1.0
SG A:CYS143 2.3 7.4 1.0
SG A:CYS118 2.3 7.8 1.0
SG A:CYS115 2.3 6.9 1.0
CE1 A:HIS140 3.0 6.9 1.0
CB A:CYS115 3.1 7.3 1.0
CG A:HIS140 3.2 7.0 1.0
CB A:CYS118 3.3 8.4 1.0
CB A:CYS143 3.4 7.0 1.0
CB A:HIS140 3.5 7.2 1.0
N A:CYS118 3.8 6.8 1.0
PB A:PB303 3.9 8.3 0.9
N A:HIS140 3.9 6.5 1.0
O1 A:CIT309 3.9 9.1 1.0
CA A:CYS118 4.1 6.8 1.0
NE2 A:HIS140 4.2 7.1 1.0
CD2 A:HIS140 4.3 7.4 1.0
CA A:HIS140 4.4 6.5 1.0
CA A:CYS115 4.6 7.3 1.0
C1 A:CIT309 4.6 8.5 1.0
CB A:HIS117 4.6 7.2 1.0
C A:CYS118 4.7 7.3 1.0
CA A:CYS143 4.8 8.0 1.0
C A:HIS117 4.9 7.2 1.0
N A:GLY119 4.9 7.2 1.0
O2 A:CIT309 4.9 8.6 1.0
CD2 A:HIS117 4.9 7.3 1.0
OG A:SER120 5.0 7.6 1.0

Zinc binding site 2 out of 2 in 6uwa

Go back to Zinc Binding Sites List in 6uwa
Zinc binding site 2 out of 2 in the Mouse Pkc C1B and C2 Domains


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Mouse Pkc C1B and C2 Domains within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn311

b:8.8
occ:1.00
ND1 A:HIS102 2.1 9.3 1.0
SG A:CYS151 2.3 9.4 1.0
SG A:CYS132 2.3 8.2 1.0
SG A:CYS135 2.3 8.9 1.0
CE1 A:HIS102 2.9 9.5 1.0
CG A:HIS102 3.2 9.1 1.0
CB A:CYS132 3.2 8.9 1.0
CB A:CYS151 3.2 9.9 1.0
CB A:CYS135 3.3 9.7 1.0
CB A:HIS102 3.6 9.1 1.0
N A:CYS135 3.8 10.4 1.0
CA A:HIS102 3.8 9.7 1.0
CA A:CYS151 3.8 9.6 1.0
NE2 A:HIS102 4.1 10.5 1.0
CA A:CYS135 4.1 10.1 1.0
CD2 A:HIS102 4.2 9.7 1.0
O A:HOH438 4.3 12.8 1.0
CB A:THR134 4.3 11.0 1.0
O A:HOH531 4.4 14.2 1.0
C A:CYS151 4.7 10.1 1.0
CA A:CYS132 4.7 8.4 1.0
N A:LYS103 4.7 9.7 1.0
N A:HIS102 4.7 10.3 1.0
C A:THR134 4.7 11.1 1.0
N A:GLY152 4.8 10.1 1.0
N A:THR134 4.8 11.9 1.0
C A:HIS102 4.8 9.6 1.0
C A:CYS135 4.9 10.0 1.0
CA A:THR134 4.9 11.3 1.0
CB A:MET137 4.9 9.2 0.6
N A:CYS151 4.9 10.4 1.0
CB A:MET137 5.0 9.2 0.4
CG2 A:THR134 5.0 11.0 1.0
O A:LYS101 5.0 11.9 1.0

Reference:

T.Igumenova, A.Aggarwal, J.Mire, J.C.Sacchettini, T.Igumenova. N/A N/A.
Page generated: Wed Dec 16 13:00:19 2020

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