Zinc in PDB 6uvn: Cryoem Structure of Vccascasde-Tniq Complex

The binding sites of Zinc atom in the Cryoem Structure of Vccascasde-Tniq Complex (pdb code 6uvn). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Cryoem Structure of Vccascasde-Tniq Complex, PDB code: 6uvn:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Cryoem Structure of Vccascasde-Tniq Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Cryoem Structure of Vccascasde-Tniq Complex within 5.0Å range: probe atom residue distance (Å) B Occ I:Zn401 b:0.4 occ:1.00 SG I:CYS128 2.3 1.0 1.0 CB I:CYS131 2.4 0.4 1.0 SG I:CYS150 2.4 0.5 1.0 ND1 I:HIS153 2.7 0.6 1.0 CE1 I:HIS153 2.9 0.6 1.0 CB I:CYS128 3.0 1.0 1.0 OG I:SER152 3.3 0.2 1.0 SG I:CYS131 3.4 0.4 1.0 CB I:CYS150 3.4 0.5 1.0 CA I:CYS131 3.5 0.4 1.0 CG I:HIS153 3.7 0.6 1.0 N I:CYS131 3.7 0.4 1.0 NE2 I:HIS153 3.8 0.6 1.0 CD2 I:HIS153 4.2 0.6 1.0 CA I:CYS128 4.4 1.0 1.0 CB I:HIS153 4.4 0.6 1.0 O I:CYS128 4.5 1.0 1.0 CA I:CYS150 4.7 0.5 1.0 CB I:SER152 4.7 0.2 1.0 CZ2 I:TRP142 4.8 0.3 1.0 C I:CYS131 4.8 0.4 1.0 N I:HIS153 4.8 0.6 1.0 C I:CYS128 4.8 1.0 1.0 C I:LEU130 5.0 0.5 1.0

Zinc binding site 2 out of 2 in the Cryoem Structure of Vccascasde-Tniq Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Cryoem Structure of Vccascasde-Tniq Complex within 5.0Å range: probe atom residue distance (Å) B Occ J:Zn401 b:0.6 occ:1.00 ND1 J:HIS153 2.0 0.7 1.0 SG J:CYS128 2.3 0.9 1.0 CB J:CYS131 2.4 0.5 1.0 SG J:CYS150 2.5 0.6 1.0 CE1 J:HIS153 2.6 0.7 1.0 CG J:HIS153 3.2 0.7 1.0 CA J:CYS131 3.2 0.5 1.0 CB J:CYS128 3.3 0.9 1.0 N J:CYS131 3.3 0.5 1.0 CB J:CYS150 3.5 0.6 1.0 SG J:CYS131 3.6 0.5 1.0 NE2 J:HIS153 3.8 0.7 1.0 CB J:HIS153 3.8 0.7 1.0 CD2 J:HIS153 4.1 0.7 1.0 O J:CYS128 4.4 0.9 1.0 C J:LEU130 4.5 0.7 1.0 CB J:SER152 4.5 0.7 1.0 CA J:CYS128 4.6 0.9 1.0 C J:CYS131 4.6 0.5 1.0 N J:HIS153 4.7 0.7 1.0 CG1 J:VAL155 4.7 1.0 1.0 C J:CYS128 4.8 0.9 1.0 CB J:LEU130 4.9 0.7 1.0 CA J:CYS150 4.9 0.6 1.0 CA J:HIS153 4.9 0.7 1.0

Z.Li, H.Zhang, R.Xiao, L.Chang. Cryo-Em Structure of A Type I-F Crispr Rna Guided Surveillance Complex Bound to Transposition Protein Tniq. Cell Res. 2020.
ISSN: ISSN 1001-0602
PubMed: 31900425
DOI: 10.1038/S41422-019-0268-Y