Atomistry » Zinc » PDB 6s53-6scy » 6sar
Atomistry »
  Zinc »
    PDB 6s53-6scy »
      6sar »

Zinc in PDB 6sar: E Coli Bepa/Yfgc

Protein crystallography data

The structure of E Coli Bepa/Yfgc, PDB code: 6sar was solved by A.L.Lovering, I.T.Cadby, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 77.02 / 2.18
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 53.120, 77.020, 124.600, 90.00, 90.00, 90.00
R / Rfree (%) 17.6 / 20.1

Zinc Binding Sites:

The binding sites of Zinc atom in the E Coli Bepa/Yfgc (pdb code 6sar). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the E Coli Bepa/Yfgc, PDB code: 6sar:

Zinc binding site 1 out of 1 in 6sar

Go back to Zinc Binding Sites List in 6sar
Zinc binding site 1 out of 1 in the E Coli Bepa/Yfgc


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of E Coli Bepa/Yfgc within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn501

b:37.5
occ:1.00
ND1 A:HIS246 2.0 44.0 1.0
NE2 A:HIS140 2.1 35.6 1.0
NE2 A:HIS136 2.2 33.3 1.0
OE2 A:GLU201 2.3 43.8 1.0
OE1 A:GLU201 2.4 40.6 1.0
CD A:GLU201 2.7 40.7 1.0
CE1 A:HIS246 2.8 41.0 1.0
CG A:HIS246 3.1 38.4 1.0
CE1 A:HIS140 3.1 36.6 1.0
CD2 A:HIS140 3.1 34.5 1.0
CD2 A:HIS136 3.1 30.5 1.0
CE1 A:HIS136 3.1 33.9 1.0
CB A:HIS246 3.5 35.3 1.0
NE2 A:HIS246 4.0 38.4 1.0
CD2 A:HIS246 4.1 35.7 1.0
CD2 A:PHE196 4.1 57.7 1.0
ND1 A:HIS140 4.2 38.3 1.0
CG A:GLU201 4.2 41.2 1.0
ND1 A:HIS136 4.2 33.3 1.0
CG A:HIS136 4.2 29.8 1.0
CG A:HIS140 4.2 34.7 1.0
CA A:HIS246 4.3 36.4 1.0
CE2 A:PHE196 4.5 56.2 1.0
CG A:PHE196 4.6 60.8 1.0
OE2 A:GLU137 4.7 47.7 1.0
CA A:GLU201 4.7 39.5 1.0
CB A:ALA204 4.8 38.1 1.0
CB A:GLU201 4.9 40.2 1.0
CB A:PHE196 4.9 61.9 1.0
NH2 A:ARG252 5.0 39.0 1.0
O A:HOH684 5.0 55.1 1.0

Reference:

J.A.Bryant, A.L.Lovering, I.T.Cadby. Structure Function Analysis of the Escherichia Coli Beta Barrel Assembly Enhancing Protease Bepa Suggests A Role For A Self Inhibitory State To Be Published.
Page generated: Tue Oct 29 07:05:24 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy