Zinc in PDB 6s8e: Cryo-Em Structure of the Type III-B Cmr-Beta Complex Bound to Non- Cognate Target Rna

The binding sites of Zinc atom in the Cryo-Em Structure of the Type III-B Cmr-Beta Complex Bound to Non- Cognate Target Rna (pdb code 6s8e). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Cryo-Em Structure of the Type III-B Cmr-Beta Complex Bound to Non- Cognate Target Rna, PDB code: 6s8e:

Zinc binding site 1 out of 1 in the Cryo-Em Structure of the Type III-B Cmr-Beta Complex Bound to Non- Cognate Target Rna


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Cryo-Em Structure of the Type III-B Cmr-Beta Complex Bound to Non- Cognate Target Rna within 5.0Å range: probe atom residue distance (Å) B Occ K:Zn1101 b:0.7 occ:1.00 SG K:CYS512 2.3 77.7 1.0 CB K:CYS467 2.4 88.4 1.0 SG K:CYS464 2.4 82.2 1.0 CB K:CYS464 2.4 82.2 1.0 CB K:CYS512 2.7 77.7 1.0 SG K:CYS515 2.9 78.1 1.0 N K:CYS467 3.2 88.4 1.0 CA K:CYS467 3.4 88.4 1.0 N K:CYS512 3.4 77.7 1.0 CA K:CYS512 3.6 77.7 1.0 SG K:CYS467 3.7 88.4 1.0 CB K:CYS515 3.7 78.1 1.0 CA K:CYS464 4.0 82.2 1.0 C K:CYS467 4.3 88.4 1.0 N K:GLY468 4.4 82.1 1.0 N K:CYS515 4.4 78.1 1.0 C K:SER466 4.5 78.5 1.0 C K:CYS512 4.5 77.7 1.0 C K:LEU511 4.6 78.5 1.0 O K:LEU470 4.6 75.8 1.0 N K:CYS464 4.7 82.2 1.0 CB K:LEU470 4.7 75.8 1.0 C K:CYS464 4.7 82.2 1.0 CA K:CYS515 4.7 78.1 1.0 O K:CYS512 4.8 77.7 1.0 N K:SER466 4.9 78.5 1.0 N K:LEU470 5.0 75.8 1.0 CA K:LEU511 5.0 78.5 1.0

N.Sofos, M.Feng, S.Stella, T.Pape, A.Fuglsang, J.Lin, Q.Huang, Y.Li, Q.She, G.Montoya. Structures of the Cmr-Beta Complex Reveal the Regulation of the Immunity Mechanism of Type III-B Crispr-Cas. Mol.Cell V. 79 741 2020.
ISSN: ISSN 1097-2765
PubMed: 32730741
DOI: 10.1016/J.MOLCEL.2020.07.008