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Zinc in PDB 6s1m: Human Polymerase Delta Holoenzyme Conformer 1

Enzymatic activity of Human Polymerase Delta Holoenzyme Conformer 1

All present enzymatic activity of Human Polymerase Delta Holoenzyme Conformer 1:
2.7.7.7;

Other elements in 6s1m:

The structure of Human Polymerase Delta Holoenzyme Conformer 1 also contains other interesting chemical elements:

Iron (Fe) 4 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Human Polymerase Delta Holoenzyme Conformer 1 (pdb code 6s1m). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Human Polymerase Delta Holoenzyme Conformer 1, PDB code: 6s1m:

Zinc binding site 1 out of 1 in 6s1m

Go back to Zinc Binding Sites List in 6s1m
Zinc binding site 1 out of 1 in the Human Polymerase Delta Holoenzyme Conformer 1


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Human Polymerase Delta Holoenzyme Conformer 1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1201

b:62.4
occ:1.00
SG A:CYS1029 2.0 40.6 1.0
CB A:CYS1026 2.1 40.6 1.0
SG A:CYS1015 2.3 40.6 1.0
SG A:CYS1012 2.5 40.6 1.0
SG A:CYS1026 2.5 40.6 1.0
CA A:CYS1026 3.5 40.6 1.0
CB A:CYS1015 3.6 40.6 1.0
CB A:CYS1012 3.6 40.6 1.0
CB A:CYS1029 3.7 40.6 1.0
N A:CYS1015 3.9 40.6 1.0
N A:CYS1026 3.9 40.6 1.0
CA A:CYS1015 4.3 40.6 1.0
C A:CYS1026 4.3 40.6 1.0
N A:CYS1029 4.3 40.6 1.0
CA A:CYS1029 4.6 40.6 1.0
C A:GLY1014 4.7 31.3 1.0
O A:CYS1026 4.8 40.6 1.0
CA A:GLY1014 4.8 31.3 1.0
C A:CYS1015 4.9 40.6 1.0
N A:GLY1014 4.9 31.3 1.0

Reference:

C.Lancey, M.Tehseen, V.S.Raducanu, F.Rashid, N.Merino, T.J.Ragan, C.Savva, M.S.Zaher, A.Shirbini, F.J.Blanco, S.M.Hamdan, A.De Biasio. Structure of the Processive Human Pol Delta Holoenzyme To Be Published.
Page generated: Wed Dec 16 12:44:34 2020

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