Zinc in PDB 6s0k: Ribosome Nascent Chain in Complex with Seca

The structure of Ribosome Nascent Chain in Complex with Seca also contains other interesting chemical elements:

Magnesium

(Mg)

68 atoms

The binding sites of Zinc atom in the Ribosome Nascent Chain in Complex with Seca (pdb code 6s0k). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Ribosome Nascent Chain in Complex with Seca, PDB code: 6s0k:

Zinc binding site 1 out of 1 in the Ribosome Nascent Chain in Complex with Seca


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Ribosome Nascent Chain in Complex with Seca within 5.0Å range: probe atom residue distance (Å) B Occ f:Zn101 b:95.5 occ:1.00 ND1 f:HIS33 2.2 80.5 1.0 SG f:CYS14 2.4 82.1 1.0 SG f:CYS11 2.5 81.8 1.0 SG f:CYS27 2.5 84.2 1.0 CG f:HIS33 2.9 80.5 1.0 CB f:HIS33 2.9 80.5 1.0 CB f:CYS27 3.0 84.2 1.0 CE1 f:HIS33 3.4 80.5 1.0 CB f:CYS11 3.7 81.8 1.0 CB f:CYS14 3.8 82.1 1.0 N f:CYS14 3.8 82.1 1.0 N f:CYS11 4.0 81.8 1.0 CA f:CYS14 4.0 82.1 1.0 CD2 f:HIS33 4.1 80.5 1.0 CA f:CYS27 4.3 84.2 1.0 NE2 f:HIS33 4.3 80.5 1.0 C f:ASN13 4.4 84.0 1.0 CA f:CYS11 4.4 81.8 1.0 CA f:HIS33 4.4 80.5 1.0 CB f:GLU30 4.5 82.8 1.0 O f:GLU30 4.6 82.8 1.0 CB f:LEU10 4.7 79.8 1.0 C f:LEU10 4.7 79.8 1.0 N f:GLU30 4.8 82.8 1.0 O f:ASN13 4.9 84.0 1.0 C f:CYS11 4.9 81.8 1.0 O f:HIS33 4.9 80.5 1.0 N f:LEU10 4.9 79.8 1.0 CB f:ASN13 4.9 84.0 1.0 C f:HIS33 5.0 80.5 1.0 N f:ASN13 5.0 84.0 1.0

S.Wang, A.Jomaa, M.Jaskolowski, C.I.Yang, N.Ban, S.O.Shan. The Molecular Mechanism of Cotranslational Membrane Protein Recognition and Targeting By Seca. Nat.Struct.Mol.Biol. V. 26 919 2019.
ISSN: ESSN 1545-9985
PubMed: 31570874
DOI: 10.1038/S41594-019-0297-8