Zinc in PDB 6rim: Crystal Structure of the Catalytic Domain of the Weissela Oryzae Botulinum Like Toxin
Enzymatic activity of Crystal Structure of the Catalytic Domain of the Weissela Oryzae Botulinum Like Toxin
All present enzymatic activity of Crystal Structure of the Catalytic Domain of the Weissela Oryzae Botulinum Like Toxin:
3.4.24.69;
3.4.24.69;
Protein crystallography data
The structure of Crystal Structure of the Catalytic Domain of the Weissela Oryzae Botulinum Like Toxin, PDB code: 6rim
was solved by
S.Kosenina,
G.Masuyer,
P.Stenmark,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 58.63 / 1.60 |
| Space group | P 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 57.908, 105.208, 179.621, 101.71, 90.00, 90.00 |
| R / Rfree (%) | 15.1 / 20.2 |
Other elements in 6rim:
The structure of Crystal Structure of the Catalytic Domain of the Weissela Oryzae Botulinum Like Toxin also contains other interesting chemical elements:
| Calcium | (Ca) | 8 atoms |
Zinc Binding Sites:
The binding sites of Zinc atom in the Crystal Structure of the Catalytic Domain of the Weissela Oryzae Botulinum Like Toxin
(pdb code 6rim). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 8 binding sites of Zinc where determined in the Crystal Structure of the Catalytic Domain of the Weissela Oryzae Botulinum Like Toxin, PDB code: 6rim:
Jump to Zinc binding site number: 1; 2; 3; 4; 5; 6; 7; 8;
In total 8 binding sites of Zinc where determined in the Crystal Structure of the Catalytic Domain of the Weissela Oryzae Botulinum Like Toxin, PDB code: 6rim:
Jump to Zinc binding site number: 1; 2; 3; 4; 5; 6; 7; 8;
Zinc binding site 1 out of 8 in 6rim
Go back to
Zinc Binding Sites List in 6rim
Zinc binding site 1 out
of 8 in the Crystal Structure of the Catalytic Domain of the Weissela Oryzae Botulinum Like Toxin
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Crystal Structure of the Catalytic Domain of the Weissela Oryzae Botulinum Like Toxin within 5.0Å range:
|
Zinc binding site 2 out of 8 in 6rim
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Zinc Binding Sites List in 6rim
Zinc binding site 2 out
of 8 in the Crystal Structure of the Catalytic Domain of the Weissela Oryzae Botulinum Like Toxin
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Crystal Structure of the Catalytic Domain of the Weissela Oryzae Botulinum Like Toxin within 5.0Å range:
|
Zinc binding site 3 out of 8 in 6rim
Go back to
Zinc Binding Sites List in 6rim
Zinc binding site 3 out
of 8 in the Crystal Structure of the Catalytic Domain of the Weissela Oryzae Botulinum Like Toxin
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 3 of Crystal Structure of the Catalytic Domain of the Weissela Oryzae Botulinum Like Toxin within 5.0Å range:
|
Zinc binding site 4 out of 8 in 6rim
Go back to
Zinc Binding Sites List in 6rim
Zinc binding site 4 out
of 8 in the Crystal Structure of the Catalytic Domain of the Weissela Oryzae Botulinum Like Toxin
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 4 of Crystal Structure of the Catalytic Domain of the Weissela Oryzae Botulinum Like Toxin within 5.0Å range:
|
Zinc binding site 5 out of 8 in 6rim
Go back to
Zinc Binding Sites List in 6rim
Zinc binding site 5 out
of 8 in the Crystal Structure of the Catalytic Domain of the Weissela Oryzae Botulinum Like Toxin
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 5 of Crystal Structure of the Catalytic Domain of the Weissela Oryzae Botulinum Like Toxin within 5.0Å range:
|
Zinc binding site 6 out of 8 in 6rim
Go back to
Zinc Binding Sites List in 6rim
Zinc binding site 6 out
of 8 in the Crystal Structure of the Catalytic Domain of the Weissela Oryzae Botulinum Like Toxin
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 6 of Crystal Structure of the Catalytic Domain of the Weissela Oryzae Botulinum Like Toxin within 5.0Å range:
|
Zinc binding site 7 out of 8 in 6rim
Go back to
Zinc Binding Sites List in 6rim
Zinc binding site 7 out
of 8 in the Crystal Structure of the Catalytic Domain of the Weissela Oryzae Botulinum Like Toxin
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 7 of Crystal Structure of the Catalytic Domain of the Weissela Oryzae Botulinum Like Toxin within 5.0Å range:
|
Zinc binding site 8 out of 8 in 6rim
Go back to
Zinc Binding Sites List in 6rim
Zinc binding site 8 out
of 8 in the Crystal Structure of the Catalytic Domain of the Weissela Oryzae Botulinum Like Toxin
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 8 of Crystal Structure of the Catalytic Domain of the Weissela Oryzae Botulinum Like Toxin within 5.0Å range:
|
Reference:
S.Kosenina,
G.Masuyer,
S.Zhang,
M.Dong,
P.Stenmark.
Crystal Structure of the Catalytic Domain of the Weissella Oryzae Botulinum-Like Toxin. Febs Lett. V. 593 1403 2019.
ISSN: ISSN 0014-5793
PubMed: 31111466
DOI: 10.1002/1873-3468.13446
Page generated: Wed Dec 16 12:40:34 2020
ISSN: ISSN 0014-5793
PubMed: 31111466
DOI: 10.1002/1873-3468.13446
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