Zinc in PDB 6nzl: Solution Structure of Pos-1, A Ccch-Type Tandem Zinc Finger Protein From C. Elegans
Zinc Binding Sites:
The binding sites of Zinc atom in the Solution Structure of Pos-1, A Ccch-Type Tandem Zinc Finger Protein From C. Elegans
(pdb code 6nzl). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the
Solution Structure of Pos-1, A Ccch-Type Tandem Zinc Finger Protein From C. Elegans, PDB code: 6nzl:
Jump to Zinc binding site number:
1;
2;
Zinc binding site 1 out
of 2 in 6nzl
Go back to
Zinc Binding Sites List in 6nzl
Zinc binding site 1 out
of 2 in the Solution Structure of Pos-1, A Ccch-Type Tandem Zinc Finger Protein From C. Elegans
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Solution Structure of Pos-1, A Ccch-Type Tandem Zinc Finger Protein From C. Elegans within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn201
b:34.5
occ:1.00
|
SG
|
A:CYS119
|
2.0
|
25.1
|
1.0
|
SG
|
A:CYS113
|
2.0
|
53.1
|
1.0
|
NE2
|
A:HIS123
|
2.0
|
3.4
|
1.0
|
SG
|
A:CYS104
|
2.0
|
72.4
|
1.0
|
HB2
|
A:CYS119
|
2.7
|
38.3
|
1.0
|
CB
|
A:CYS119
|
2.8
|
63.0
|
1.0
|
CD2
|
A:HIS123
|
3.0
|
2.5
|
1.0
|
HB2
|
A:CYS104
|
3.0
|
38.3
|
1.0
|
HB3
|
A:CYS119
|
3.1
|
38.3
|
1.0
|
CE1
|
A:HIS123
|
3.1
|
3.2
|
1.0
|
CB
|
A:CYS104
|
3.2
|
11.2
|
1.0
|
HD2
|
A:HIS123
|
3.2
|
74.3
|
1.0
|
HB2
|
A:CYS113
|
3.2
|
38.3
|
1.0
|
CB
|
A:CYS113
|
3.3
|
23.3
|
1.0
|
HE1
|
A:HIS123
|
3.4
|
13.1
|
1.0
|
HB3
|
A:CYS104
|
3.6
|
38.3
|
1.0
|
HB2
|
A:PHE121
|
3.7
|
38.3
|
1.0
|
HB2
|
A:TYR107
|
3.7
|
38.3
|
1.0
|
HB3
|
A:CYS113
|
3.7
|
38.3
|
1.0
|
HB2
|
A:ALA106
|
4.1
|
38.3
|
1.0
|
CG
|
A:HIS123
|
4.2
|
73.2
|
1.0
|
ND1
|
A:HIS123
|
4.2
|
71.3
|
1.0
|
CA
|
A:CYS119
|
4.3
|
21.0
|
1.0
|
H
|
A:PHE121
|
4.4
|
38.3
|
1.0
|
O
|
A:PHE121
|
4.4
|
45.1
|
1.0
|
H
|
A:TYR107
|
4.4
|
38.3
|
1.0
|
O
|
A:GLY116
|
4.4
|
52.3
|
1.0
|
CA
|
A:CYS104
|
4.5
|
74.1
|
1.0
|
HA
|
A:CYS104
|
4.5
|
62.3
|
1.0
|
HA
|
A:CYS119
|
4.5
|
20.1
|
1.0
|
HB3
|
A:TYR107
|
4.6
|
38.3
|
1.0
|
CA
|
A:CYS113
|
4.6
|
42.0
|
1.0
|
HD2
|
A:PHE121
|
4.6
|
32.1
|
1.0
|
CB
|
A:TYR107
|
4.6
|
70.1
|
1.0
|
HA
|
A:CYS113
|
4.6
|
74.4
|
1.0
|
CB
|
A:PHE121
|
4.7
|
71.5
|
1.0
|
HB2
|
A:TYR115
|
4.8
|
38.3
|
1.0
|
H
|
A:GLY116
|
4.9
|
38.3
|
1.0
|
C
|
A:PHE121
|
4.9
|
32.2
|
1.0
|
N
|
A:TYR107
|
5.0
|
30.4
|
1.0
|
C
|
A:CYS119
|
5.0
|
23.3
|
1.0
|
|
Zinc binding site 2 out
of 2 in 6nzl
Go back to
Zinc Binding Sites List in 6nzl
Zinc binding site 2 out
of 2 in the Solution Structure of Pos-1, A Ccch-Type Tandem Zinc Finger Protein From C. Elegans
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Solution Structure of Pos-1, A Ccch-Type Tandem Zinc Finger Protein From C. Elegans within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn202
b:40.5
occ:1.00
|
NE2
|
A:HIS166
|
2.0
|
70.1
|
1.0
|
SG
|
A:CYS162
|
2.0
|
23.0
|
1.0
|
SG
|
A:CYS156
|
2.0
|
54.4
|
1.0
|
SG
|
A:CYS147
|
2.1
|
2.0
|
1.0
|
CD2
|
A:HIS166
|
2.7
|
10.3
|
1.0
|
HD2
|
A:HIS166
|
2.8
|
61.2
|
1.0
|
HB2
|
A:CYS156
|
2.8
|
38.3
|
1.0
|
CB
|
A:CYS156
|
2.9
|
65.4
|
1.0
|
HB2
|
A:CYS162
|
2.9
|
38.3
|
1.0
|
CB
|
A:CYS162
|
3.0
|
73.1
|
1.0
|
HB3
|
A:CYS156
|
3.1
|
38.3
|
1.0
|
CE1
|
A:HIS166
|
3.2
|
41.3
|
1.0
|
HB3
|
A:CYS162
|
3.3
|
38.3
|
1.0
|
HB2
|
A:CYS147
|
3.4
|
38.3
|
1.0
|
CB
|
A:CYS147
|
3.4
|
40.1
|
1.0
|
HB2
|
A:PHE164
|
3.5
|
38.3
|
1.0
|
HE1
|
A:HIS166
|
3.6
|
61.5
|
1.0
|
HB2
|
A:PHE150
|
3.7
|
38.3
|
1.0
|
HB3
|
A:CYS147
|
3.9
|
38.3
|
1.0
|
CG
|
A:HIS166
|
4.0
|
61.2
|
1.0
|
O
|
A:PHE164
|
4.0
|
41.5
|
1.0
|
ND1
|
A:HIS166
|
4.2
|
62.4
|
1.0
|
HB2
|
A:TYR158
|
4.3
|
38.3
|
1.0
|
H
|
A:PHE164
|
4.3
|
38.3
|
1.0
|
CA
|
A:CYS156
|
4.3
|
60.1
|
1.0
|
CA
|
A:CYS162
|
4.4
|
70.3
|
1.0
|
HD2
|
A:PHE164
|
4.4
|
51.1
|
1.0
|
HD1
|
A:TYR158
|
4.5
|
44.2
|
1.0
|
HA
|
A:CYS162
|
4.5
|
75.0
|
1.0
|
CB
|
A:PHE164
|
4.5
|
21.4
|
1.0
|
H
|
A:GLY159
|
4.6
|
38.3
|
1.0
|
HA
|
A:CYS156
|
4.6
|
62.3
|
1.0
|
HA
|
A:CYS147
|
4.7
|
74.4
|
1.0
|
CB
|
A:PHE150
|
4.7
|
20.1
|
1.0
|
H
|
A:PHE150
|
4.7
|
38.3
|
1.0
|
CA
|
A:CYS147
|
4.7
|
61.4
|
1.0
|
HB3
|
A:PHE150
|
4.8
|
38.3
|
1.0
|
HB2
|
A:LYS149
|
4.8
|
38.3
|
1.0
|
C
|
A:PHE164
|
4.8
|
72.3
|
1.0
|
O
|
A:GLY159
|
4.9
|
20.0
|
1.0
|
HB3
|
A:PHE164
|
4.9
|
38.3
|
1.0
|
|
Reference:
A.Ertekin,
F.Massi.
Solution Structure of Pos-1, A Ccch-Type Tandem Zinc Finger Protein From C. Elegans To Be Published.
Page generated: Tue Oct 29 04:02:01 2024
|