Zinc in PDB 6nyb: Structure of A Mapk Pathway Complex

Enzymatic activity of Structure of A Mapk Pathway Complex

All present enzymatic activity of Structure of A Mapk Pathway Complex:
2.7.11.1; 2.7.12.2;

Other elements in 6nyb:

The structure of Structure of A Mapk Pathway Complex also contains other interesting chemical elements:

Fluorine (F) 1 atom
Magnesium (Mg) 1 atom
Iodine (I) 1 atom

Zinc Binding Sites:

The binding sites of Zinc atom in the Structure of A Mapk Pathway Complex (pdb code 6nyb). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Structure of A Mapk Pathway Complex, PDB code: 6nyb:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 6nyb

Go back to Zinc Binding Sites List in 6nyb
Zinc binding site 1 out of 2 in the Structure of A Mapk Pathway Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of A Mapk Pathway Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn901

b:0.7
occ:1.00
SG A:CYS272 1.8 0.6 1.0
SG A:CYS248 2.2 69.5 1.0
SG A:CYS251 2.7 79.6 1.0
CB A:CYS251 3.2 79.6 1.0
CD2 A:HIS269 3.2 90.5 1.0
CG A:HIS269 3.3 90.5 1.0
CB A:HIS269 3.3 90.5 1.0
N A:CYS251 3.4 79.6 1.0
CB A:CYS248 3.4 69.5 1.0
CB A:CYS272 3.6 0.6 1.0
CA A:CYS251 3.9 79.6 1.0
CB A:PHE250 4.1 86.6 1.0
N A:HIS269 4.1 90.5 1.0
NE2 A:HIS269 4.1 90.5 1.0
ND1 A:HIS269 4.2 90.5 1.0
O A:CYS272 4.4 0.6 1.0
CA A:HIS269 4.4 90.5 1.0
C A:PHE250 4.4 86.6 1.0
N A:PHE250 4.4 86.6 1.0
CA A:PHE250 4.5 86.6 1.0
CA A:CYS272 4.6 0.6 1.0
CE1 A:HIS269 4.6 90.5 1.0
N A:CYS272 4.7 0.6 1.0
CD2 A:PHE250 4.7 86.6 1.0
CA A:CYS248 4.8 69.5 1.0
C A:CYS272 4.8 0.6 1.0
NH2 A:ARG271 4.8 0.3 1.0
CG A:PHE250 4.9 86.6 1.0
C A:CYS251 4.9 79.6 1.0
C A:CYS248 5.0 69.5 1.0
N A:ARG252 5.0 68.1 1.0

Zinc binding site 2 out of 2 in 6nyb

Go back to Zinc Binding Sites List in 6nyb
Zinc binding site 2 out of 2 in the Structure of A Mapk Pathway Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Structure of A Mapk Pathway Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn902

b:1.0
occ:1.00
SG A:CYS280 1.9 0.4 1.0
NE2 A:HIS235 2.5 0.2 1.0
SG A:CYS264 2.5 0.3 1.0
SG A:CYS261 2.9 0.9 1.0
CB A:CYS264 3.0 0.3 1.0
CB A:CYS280 3.0 0.4 1.0
CD2 A:HIS235 3.0 0.2 1.0
N A:CYS264 3.1 0.3 1.0
CB A:THR263 3.3 0.5 1.0
CG2 A:THR263 3.4 0.5 1.0
CA A:CYS264 3.6 0.3 1.0
CE1 A:HIS235 3.7 0.2 1.0
CA A:CYS280 3.8 0.4 1.0
C A:THR263 4.0 0.5 1.0
CA A:THR263 4.2 0.5 1.0
CB A:CYS261 4.2 0.9 1.0
CG A:HIS235 4.3 0.2 1.0
OG1 A:THR263 4.3 0.5 1.0
ND1 A:HIS235 4.6 0.2 1.0
N A:THR263 4.7 0.5 1.0
N A:CYS280 4.8 0.4 1.0
C A:CYS264 4.9 0.3 1.0
C A:CYS280 4.9 0.4 1.0
N A:GLY265 5.0 94.0 1.0

Reference:

M.J.Eck, H.Jeon, E.Park, S.Rawson, K.Li. Structure of A Mapk Pathway Complex To Be Published.
Page generated: Wed Dec 16 12:24:43 2020

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