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Zinc in PDB 6m1w: Structure of the 2-Aminoisobutyric Acid Monooxygenase Hydroxylase

Protein crystallography data

The structure of Structure of the 2-Aminoisobutyric Acid Monooxygenase Hydroxylase, PDB code: 6m1w was solved by M.Hibi, B.Mikami, J.Ogawa, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.12 / 2.75
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 125.49, 208.05, 90.66, 90, 90, 90
R / Rfree (%) 19 / 25

Other elements in 6m1w:

The structure of Structure of the 2-Aminoisobutyric Acid Monooxygenase Hydroxylase also contains other interesting chemical elements:

Chlorine (Cl) 1 atom
Iron (Fe) 2 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Structure of the 2-Aminoisobutyric Acid Monooxygenase Hydroxylase (pdb code 6m1w). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Structure of the 2-Aminoisobutyric Acid Monooxygenase Hydroxylase, PDB code: 6m1w:

Zinc binding site 1 out of 1 in 6m1w

Go back to Zinc Binding Sites List in 6m1w
Zinc binding site 1 out of 1 in the Structure of the 2-Aminoisobutyric Acid Monooxygenase Hydroxylase


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of the 2-Aminoisobutyric Acid Monooxygenase Hydroxylase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn401

b:49.5
occ:1.00
NE2 A:HIS38 2.1 41.4 1.0
NE2 A:HIS213 2.2 32.1 1.0
OD1 A:ASP340 2.2 29.6 1.0
OD2 A:ASP36 2.2 37.2 1.0
OE2 A:GLU267 2.4 27.7 1.0
CG A:ASP36 2.9 31.1 1.0
OD1 A:ASP36 2.9 29.8 1.0
CE1 A:HIS38 2.9 34.5 1.0
CE1 A:HIS213 3.1 32.0 1.0
CD2 A:HIS38 3.2 34.7 1.0
CB A:GLU267 3.3 21.8 1.0
CD2 A:HIS213 3.3 31.1 1.0
CD A:GLU267 3.3 33.5 1.0
CG A:ASP340 3.4 29.9 1.0
CG A:GLU267 3.5 26.1 1.0
OD2 A:ASP340 4.1 32.0 1.0
ND1 A:HIS38 4.1 35.2 1.0
CD2 A:HIS343 4.1 31.0 1.0
NE2 A:HIS343 4.2 33.2 1.0
CG A:HIS38 4.3 33.5 1.0
ND1 A:HIS213 4.3 30.9 1.0
CB A:ASP36 4.3 30.6 1.0
CG A:HIS213 4.4 31.4 1.0
CB A:ASP340 4.5 30.3 1.0
OE1 A:GLU267 4.5 32.5 1.0
O A:HOH505 4.6 37.4 1.0
CA A:GLU267 4.6 22.5 1.0
CA A:ASP340 4.6 35.3 1.0
N A:GLU267 4.8 20.2 1.0

Reference:

M.Hibi, B.Mikami, J.Ogawa. Catabolism of 2-Aminoisobutyric Acid Initiated By A Novel Four-Component Hydroxylase in Rhodococcus Wratislaviensis To Be Published.
Page generated: Mon Jan 25 16:33:27 2021

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