Zinc in PDB 6kle: Monomeric Structure of Machupo Virus Polymerase Bound to Vrna Promoter

Enzymatic activity of Monomeric Structure of Machupo Virus Polymerase Bound to Vrna Promoter

All present enzymatic activity of Monomeric Structure of Machupo Virus Polymerase Bound to Vrna Promoter:
2.7.7.48;

Other elements in 6kle:

The structure of Monomeric Structure of Machupo Virus Polymerase Bound to Vrna Promoter also contains other interesting chemical elements:

Manganese (Mn) 1 atom

Zinc Binding Sites:

The binding sites of Zinc atom in the Monomeric Structure of Machupo Virus Polymerase Bound to Vrna Promoter (pdb code 6kle). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Monomeric Structure of Machupo Virus Polymerase Bound to Vrna Promoter, PDB code: 6kle:

Zinc binding site 1 out of 1 in 6kle

Go back to Zinc Binding Sites List in 6kle
Zinc binding site 1 out of 1 in the Monomeric Structure of Machupo Virus Polymerase Bound to Vrna Promoter


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Monomeric Structure of Machupo Virus Polymerase Bound to Vrna Promoter within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn2302

b:0.1
occ:1.00
ND1 A:HIS472 2.1 95.3 1.0
CE1 A:HIS472 2.2 95.3 1.0
SG A:CYS284 2.4 0.9 1.0
SG A:CYS470 2.4 0.1 1.0
SG A:CYS287 2.4 1.0 1.0
CB A:CYS287 3.1 1.0 1.0
CG A:HIS472 3.3 95.3 1.0
NE2 A:HIS472 3.4 95.3 1.0
N A:CYS287 3.7 1.0 1.0
CB A:CYS470 3.7 0.1 1.0
CD2 A:HIS472 4.0 95.3 1.0
CA A:CYS287 4.0 1.0 1.0
CB A:CYS284 4.1 0.9 1.0
CB A:HIS472 4.3 95.3 1.0
CA A:CYS470 4.5 0.1 1.0
C A:PHE286 4.7 1.0 1.0
CB A:PHE286 4.8 1.0 1.0
CA A:CYS284 4.8 0.9 1.0
N A:ARG471 4.9 91.7 1.0

Reference:

R.Peng, X.Xu, J.Jing, Q.Peng, G.F.Gao, Y.Shi. Monomeric Structure of Machupo Virus Polymerase Bound to Vrna Promoter To Be Published.
Page generated: Wed Dec 16 12:07:44 2020

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