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Zinc in PDB 6k02: Crystal Structure of CENAP1 Core

Protein crystallography data

The structure of Crystal Structure of CENAP1 Core, PDB code: 6k02 was solved by Y.R.Liu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.20 / 2.16
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 95.733, 126.747, 118.192, 90.00, 90.00, 90.00
R / Rfree (%) 25 / 27.9

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of CENAP1 Core (pdb code 6k02). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of CENAP1 Core, PDB code: 6k02:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 6k02

Go back to Zinc Binding Sites List in 6k02
Zinc binding site 1 out of 2 in the Crystal Structure of CENAP1 Core


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of CENAP1 Core within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn301

b:19.8
occ:1.00
OE1 A:GLU55 1.9 19.4 1.0
ND1 A:HIS52 2.0 22.9 1.0
O A:HOH425 2.1 13.6 1.0
O A:HOH429 2.2 7.3 1.0
CE1 A:HIS52 2.9 24.0 1.0
CD A:GLU55 3.0 21.6 1.0
CG A:HIS52 3.2 22.9 1.0
OE2 A:GLU55 3.5 25.9 1.0
CB A:HIS52 3.7 14.5 1.0
CA A:HIS52 3.8 14.1 1.0
NE2 A:HIS52 4.1 23.5 1.0
CD2 A:HIS52 4.2 22.7 1.0
CZ A:PHE181 4.3 19.9 1.0
CG A:GLU55 4.3 20.6 1.0
NH2 A:ARG277 4.5 16.8 1.0
CB A:GLU55 4.6 16.9 1.0
N A:HIS52 4.6 16.8 1.0
O A:HIS52 4.8 14.8 1.0
C A:HIS52 4.8 17.5 1.0
CB A:ALA149 4.8 21.1 1.0
CE1 A:PHE181 4.8 17.3 1.0
CD1 A:LEU179 4.9 22.3 1.0

Zinc binding site 2 out of 2 in 6k02

Go back to Zinc Binding Sites List in 6k02
Zinc binding site 2 out of 2 in the Crystal Structure of CENAP1 Core


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of CENAP1 Core within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn301

b:19.4
occ:1.00
OE1 B:GLU55 2.0 24.0 1.0
ND1 B:HIS52 2.0 25.7 1.0
O B:HOH423 2.1 10.5 1.0
O B:HOH426 2.3 6.0 1.0
CE1 B:HIS52 2.9 23.5 1.0
CD B:GLU55 3.1 25.1 1.0
CG B:HIS52 3.2 24.3 1.0
OE2 B:GLU55 3.6 29.1 1.0
CB B:HIS52 3.6 18.9 1.0
CA B:HIS52 3.7 17.4 1.0
NE2 B:HIS52 4.0 24.6 1.0
CD2 B:HIS52 4.2 24.4 1.0
CZ B:PHE181 4.4 22.3 1.0
CG B:GLU55 4.4 21.8 1.0
NH2 B:ARG277 4.5 19.6 1.0
N B:HIS52 4.6 14.3 1.0
CB B:GLU55 4.7 19.9 1.0
O B:HIS52 4.8 17.8 1.0
C B:HIS52 4.8 19.5 1.0
CE1 B:PHE181 4.9 18.6 1.0
CD1 B:LEU179 4.9 27.0 1.0
CB B:ALA149 4.9 20.2 1.0

Reference:

Y.R.Liu, Y.R.Liu. N/A N/A.
ISSN: ISSN 0969-2126
Page generated: Tue Oct 29 01:27:28 2024

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