Atomistry » Zinc » PDB 6jqe-6kaj » 6jtz
Atomistry »
  Zinc »
    PDB 6jqe-6kaj »
      6jtz »

Zinc in PDB 6jtz: Crystal Structure of HRECQ1_D2-Zn-Wh Containing Mutation on Beta- Hairpin

Enzymatic activity of Crystal Structure of HRECQ1_D2-Zn-Wh Containing Mutation on Beta- Hairpin

All present enzymatic activity of Crystal Structure of HRECQ1_D2-Zn-Wh Containing Mutation on Beta- Hairpin:
3.6.4.12;

Protein crystallography data

The structure of Crystal Structure of HRECQ1_D2-Zn-Wh Containing Mutation on Beta- Hairpin, PDB code: 6jtz was solved by T.Das, S.Mukhopadhyay, M.Bose, A.K.Das, A.Ganguly, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.69 / 2.80
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 52.950, 101.835, 73.434, 90.00, 99.07, 90.00
R / Rfree (%) 22.7 / 28.2

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of HRECQ1_D2-Zn-Wh Containing Mutation on Beta- Hairpin (pdb code 6jtz). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of HRECQ1_D2-Zn-Wh Containing Mutation on Beta- Hairpin, PDB code: 6jtz:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 6jtz

Go back to Zinc Binding Sites List in 6jtz
Zinc binding site 1 out of 2 in the Crystal Structure of HRECQ1_D2-Zn-Wh Containing Mutation on Beta- Hairpin


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of HRECQ1_D2-Zn-Wh Containing Mutation on Beta- Hairpin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn701

b:54.0
occ:1.00
SG A:CYS453 2.3 44.2 1.0
SG A:CYS475 2.4 49.6 1.0
SG A:CYS471 2.4 35.9 1.0
SG A:CYS478 2.6 54.0 1.0
CB A:CYS471 3.1 44.9 1.0
CB A:CYS478 3.1 31.4 1.0
CB A:CYS475 3.3 30.1 1.0
CB A:CYS453 3.4 37.8 1.0
CA A:CYS453 4.0 33.5 1.0
N A:CYS475 4.0 27.1 1.0
N A:ARG454 4.2 42.0 1.0
CA A:CYS475 4.2 32.6 1.0
CA A:CYS478 4.3 34.2 1.0
N A:CYS478 4.3 40.2 1.0
C A:CYS453 4.5 39.7 1.0
CA A:CYS471 4.6 51.4 1.0
N A:MET474 4.7 46.6 1.0
C A:MET474 4.8 37.4 1.0
N A:ARG455 4.8 42.7 1.0
C A:CYS475 4.8 31.2 1.0
O A:CYS475 4.8 28.8 1.0

Zinc binding site 2 out of 2 in 6jtz

Go back to Zinc Binding Sites List in 6jtz
Zinc binding site 2 out of 2 in the Crystal Structure of HRECQ1_D2-Zn-Wh Containing Mutation on Beta- Hairpin


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of HRECQ1_D2-Zn-Wh Containing Mutation on Beta- Hairpin within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn701

b:41.5
occ:1.00
SG B:CYS453 2.3 48.1 1.0
SG B:CYS475 2.4 61.2 1.0
SG B:CYS478 2.4 44.6 1.0
SG B:CYS471 2.7 42.3 1.0
CB B:CYS453 3.2 40.0 1.0
CB B:CYS478 3.4 39.2 1.0
CB B:CYS471 3.4 61.8 1.0
CA B:CYS453 3.7 37.5 1.0
CB B:CYS475 3.7 49.3 1.0
N B:ARG454 4.0 48.5 1.0
C B:CYS453 4.3 41.6 1.0
N B:CYS478 4.4 46.0 1.0
CA B:CYS478 4.4 42.4 1.0
N B:CYS475 4.5 36.5 1.0
O B:CYS471 4.6 65.9 1.0
CA B:CYS475 4.7 37.1 1.0
N B:MET474 4.7 44.5 1.0
C B:MET474 4.8 37.9 1.0
CA B:CYS471 4.8 60.2 1.0
N B:ARG455 4.8 44.7 1.0
O B:MET474 5.0 32.9 1.0
N B:CYS453 5.0 37.5 1.0
C B:CYS471 5.0 59.6 1.0

Reference:

T.Das, S.Mukhopadhyay, M.Bose, A.K.Das, A.Ganguly. Crystal Structure of HRECQ1_D2-Zn-Wh Containing Mutation on Beta-Hairpin To Be Published.
Page generated: Tue Oct 29 01:23:32 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy