Zinc in PDB 6jkp: Crystal Structure of Sulfoacetaldehyde Reductase From Bifidobacterium Kashiwanohense in Complex with Nad+

The structure of Crystal Structure of Sulfoacetaldehyde Reductase From Bifidobacterium Kashiwanohense in Complex with Nad+, PDB code: 6jkp was solved by Y.Zhou, T.Xu, L.Lin, Y.Zhang, Z.Yuchi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	43.19 / 3.01
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	70.881, 112.317, 93.573, 90.00, 107.53, 90.00
R / Rfree (%)	20 / 25.7

The binding sites of Zinc atom in the Crystal Structure of Sulfoacetaldehyde Reductase From Bifidobacterium Kashiwanohense in Complex with Nad+ (pdb code 6jkp). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Sulfoacetaldehyde Reductase From Bifidobacterium Kashiwanohense in Complex with Nad+, PDB code: 6jkp:

Zinc binding site 1 out of 1 in the Crystal Structure of Sulfoacetaldehyde Reductase From Bifidobacterium Kashiwanohense in Complex with Nad+


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Sulfoacetaldehyde Reductase From Bifidobacterium Kashiwanohense in Complex with Nad+ within 5.0Å range: probe atom residue distance (Å) B Occ C:Zn402 b:0.9 occ:1.00 NE2 C:GLN196 2.5 83.7 1.0 NE2 C:HIS261 3.0 76.4 1.0 C5N C:NAD401 3.0 96.7 1.0 NE2 C:HIS275 3.2 69.2 1.0 OD1 C:ASP192 3.3 73.0 1.0 C4N C:NAD401 3.5 91.6 1.0 CD C:GLN196 3.5 74.7 1.0 CD2 C:HIS261 3.5 75.9 1.0 OD2 C:ASP192 3.6 77.4 1.0 CG C:ASP192 3.8 69.4 1.0 CG C:GLN196 3.8 70.7 1.0 CD2 C:HIS275 3.9 66.2 1.0 CE1 C:HIS261 4.1 67.6 1.0 C6N C:NAD401 4.2 0.4 1.0 CE1 C:HIS275 4.3 74.0 1.0 OE1 C:GLN196 4.5 71.8 1.0 O C:THR140 4.6 88.0 1.0 CG C:HIS261 4.8 60.2 1.0 C3N C:NAD401 4.9 0.9 1.0

Y.Zhou, Y.Wei, A.N.Nanjaraj Urs, L.Lin, T.Xu, Y.Hu, E.L.Ang, H.Zhao, Z.Yuchi, Y.Zhang. Identification and Characterization of A New Sulfoacetaldehyde Reductase From the Human Gut Bacteriumbifidobacterium Kashiwanohense. Biosci.Rep. V. 39 2019.
ISSN: ISSN 0144-8463
PubMed: 31123167
DOI: 10.1042/BSR20190715