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Zinc in PDB 6ixx: Crystal Structure of A Complex Between Psychrophilic Marine Protease Mp and Its Inhibitor Lupi

Protein crystallography data

The structure of Crystal Structure of A Complex Between Psychrophilic Marine Protease Mp and Its Inhibitor Lupi, PDB code: 6ixx was solved by J.H.Hao, L.H.Zhang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.67 / 2.00
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 51.664, 51.852, 102.142, 90.00, 97.68, 90.00
R / Rfree (%) 18.4 / 23

Other elements in 6ixx:

The structure of Crystal Structure of A Complex Between Psychrophilic Marine Protease Mp and Its Inhibitor Lupi also contains other interesting chemical elements:

Calcium (Ca) 8 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of A Complex Between Psychrophilic Marine Protease Mp and Its Inhibitor Lupi (pdb code 6ixx). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of A Complex Between Psychrophilic Marine Protease Mp and Its Inhibitor Lupi, PDB code: 6ixx:

Zinc binding site 1 out of 1 in 6ixx

Go back to Zinc Binding Sites List in 6ixx
Zinc binding site 1 out of 1 in the Crystal Structure of A Complex Between Psychrophilic Marine Protease Mp and Its Inhibitor Lupi


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of A Complex Between Psychrophilic Marine Protease Mp and Its Inhibitor Lupi within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn509

b:28.6
occ:1.00
NE2 A:HIS190 2.0 28.2 1.0
NE2 A:HIS186 2.0 26.5 1.0
NE2 A:HIS196 2.0 26.3 1.0
O A:HOH628 2.1 28.6 1.0
CD2 A:HIS190 2.8 30.1 1.0
CD2 A:HIS196 2.9 25.7 1.0
CD2 A:HIS186 3.0 27.0 1.0
CE1 A:HIS196 3.0 30.1 1.0
CE1 A:HIS186 3.1 25.5 1.0
CE1 A:HIS190 3.1 28.1 1.0
OE2 A:GLU187 3.8 29.2 1.0
N I:SER2 3.9 27.3 1.0
CG A:HIS190 4.0 31.7 1.0
CG A:HIS196 4.1 25.5 1.0
ND1 A:HIS196 4.1 27.0 1.0
CG A:HIS186 4.1 28.7 1.0
ND1 A:HIS190 4.1 28.9 1.0
ND1 A:HIS186 4.1 28.2 1.0
OE1 A:GLU187 4.3 30.5 1.0
OG I:SER2 4.3 30.7 1.0
CD A:GLU187 4.4 31.8 1.0
OH A:TYR226 4.6 26.0 1.0
CE A:MET224 4.6 26.6 1.0
CE2 A:TYR226 4.6 28.6 1.0
CA I:SER2 4.7 31.6 1.0

Reference:

J.H.Hao, J.H.Hao, L.H.Zhang. N/A N/A.
Page generated: Wed Dec 16 12:02:21 2020

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