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Zinc in PDB 6g72: Mouse Mitochondrial Complex I in the Deactive State

Enzymatic activity of Mouse Mitochondrial Complex I in the Deactive State

All present enzymatic activity of Mouse Mitochondrial Complex I in the Deactive State:
1.6.5.3; 1.6.99.3;

Other elements in 6g72:

The structure of Mouse Mitochondrial Complex I in the Deactive State also contains other interesting chemical elements:

Iron (Fe) 28 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Mouse Mitochondrial Complex I in the Deactive State (pdb code 6g72). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Mouse Mitochondrial Complex I in the Deactive State, PDB code: 6g72:

Zinc binding site 1 out of 1 in 6g72

Go back to Zinc Binding Sites List in 6g72
Zinc binding site 1 out of 1 in the Mouse Mitochondrial Complex I in the Deactive State


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Mouse Mitochondrial Complex I in the Deactive State within 5.0Å range:
probe atom residue distance (Å) B Occ
R:Zn201

b:76.6
occ:1.00
NE2 R:HIS68 2.0 53.9 1.0
CD2 R:HIS68 2.2 53.9 1.0
SG R:CYS84 2.3 54.2 1.0
SG R:CYS87 2.4 53.5 1.0
SG R:CYS59 2.4 56.2 1.0
CE1 R:HIS68 2.8 53.9 1.0
CG R:HIS68 3.1 53.9 1.0
ND1 R:HIS68 3.3 53.9 1.0
CB R:CYS87 3.4 53.5 1.0
CB R:CYS84 3.4 54.2 1.0
CB R:CYS59 3.5 56.2 1.0
N R:CYS87 4.2 53.5 1.0
CB R:HIS68 4.3 53.9 1.0
CA R:CYS87 4.4 53.5 1.0
N R:ASP60 4.4 55.3 1.0
CD1 R:LEU89 4.4 56.8 1.0
O R:ASP60 4.5 55.3 1.0
C R:CYS59 4.6 56.2 1.0
C R:ASP60 4.7 55.3 1.0
CA R:CYS59 4.7 56.2 1.0
CA R:CYS84 4.8 54.2 1.0
O R:CYS84 4.8 54.2 1.0
CA R:ASP60 4.9 55.3 1.0
CB R:TYR86 5.0 51.2 1.0

Reference:

A.A.Agip, J.N.Blaza, H.R.Bridges, C.Viscomi, S.Rawson, S.P.Muench, J.Hirst. Cryo-Em Structures of Complex I From Mouse Heart Mitochondria in Two Biochemically Defined States. Nat. Struct. Mol. Biol. V. 25 548 2018.
ISSN: ESSN 1545-9985
PubMed: 29915388
DOI: 10.1038/S41594-018-0073-1
Page generated: Wed Dec 16 11:51:03 2020

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