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Zinc in PDB 6fe7: Crystal Structure of Human Phosphodiesterase 4D2 Catalytic Domain with Inhibitor Npd-356
Enzymatic activity of Crystal Structure of Human Phosphodiesterase 4D2 Catalytic Domain with Inhibitor Npd-356
All present enzymatic activity of Crystal Structure of Human Phosphodiesterase 4D2 Catalytic Domain with Inhibitor Npd-356:
3.1.4.53;
3.1.4.53;
Protein crystallography data
The structure of Crystal Structure of Human Phosphodiesterase 4D2 Catalytic Domain with Inhibitor Npd-356, PDB code: 6fe7
was solved by
A.K.Singh,
D.G.Brown,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 54.30 / 2.00 |
| Space group | P 21 21 21 |
| Cell size a, b, c (Å), α, β, γ (°) | 98.220, 111.030, 160.960, 90.00, 90.00, 90.00 |
| R / Rfree (%) | 17 / 20 |
Other elements in 6fe7:
The structure of Crystal Structure of Human Phosphodiesterase 4D2 Catalytic Domain with Inhibitor Npd-356 also contains other interesting chemical elements:
| Magnesium | (Mg) | 4 atoms |
Zinc Binding Sites:
The binding sites of Zinc atom in the Crystal Structure of Human Phosphodiesterase 4D2 Catalytic Domain with Inhibitor Npd-356
(pdb code 6fe7). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 4 binding sites of Zinc where determined in the Crystal Structure of Human Phosphodiesterase 4D2 Catalytic Domain with Inhibitor Npd-356, PDB code: 6fe7:
Jump to Zinc binding site number: 1; 2; 3; 4;
In total 4 binding sites of Zinc where determined in the Crystal Structure of Human Phosphodiesterase 4D2 Catalytic Domain with Inhibitor Npd-356, PDB code: 6fe7:
Jump to Zinc binding site number: 1; 2; 3; 4;
Zinc binding site 1 out of 4 in 6fe7
Go back to
Zinc Binding Sites List in 6fe7
Zinc binding site 1 out
of 4 in the Crystal Structure of Human Phosphodiesterase 4D2 Catalytic Domain with Inhibitor Npd-356
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Crystal Structure of Human Phosphodiesterase 4D2 Catalytic Domain with Inhibitor Npd-356 within 5.0Å range:
|
Zinc binding site 2 out of 4 in 6fe7
Go back to
Zinc Binding Sites List in 6fe7
Zinc binding site 2 out
of 4 in the Crystal Structure of Human Phosphodiesterase 4D2 Catalytic Domain with Inhibitor Npd-356
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Crystal Structure of Human Phosphodiesterase 4D2 Catalytic Domain with Inhibitor Npd-356 within 5.0Å range:
|
Zinc binding site 3 out of 4 in 6fe7
Go back to
Zinc Binding Sites List in 6fe7
Zinc binding site 3 out
of 4 in the Crystal Structure of Human Phosphodiesterase 4D2 Catalytic Domain with Inhibitor Npd-356
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 3 of Crystal Structure of Human Phosphodiesterase 4D2 Catalytic Domain with Inhibitor Npd-356 within 5.0Å range:
|
Zinc binding site 4 out of 4 in 6fe7
Go back to
Zinc Binding Sites List in 6fe7
Zinc binding site 4 out
of 4 in the Crystal Structure of Human Phosphodiesterase 4D2 Catalytic Domain with Inhibitor Npd-356
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 4 of Crystal Structure of Human Phosphodiesterase 4D2 Catalytic Domain with Inhibitor Npd-356 within 5.0Å range:
|
Reference:
I.G.Salado,
C.Moreno,
G.Sakaine,
A.K.Singh,
A.R.Blaazer,
M.Siderius,
A.Matheeussen,
S.Gul,
L.Maes,
R.Leurs,
D.G.Brown,
K.Augustyns.
HPDE4D2 Structure with Inhibitor Npd-356 To Be Published.
Page generated: Mon Oct 28 20:55:30 2024
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