Zinc in PDB 6dtk: Heterodimers of Fals Mutant Sod Enzyme
Enzymatic activity of Heterodimers of Fals Mutant Sod Enzyme
All present enzymatic activity of Heterodimers of Fals Mutant Sod Enzyme:
1.15.1.1;
Protein crystallography data
The structure of Heterodimers of Fals Mutant Sod Enzyme, PDB code: 6dtk
was solved by
V.A.Streltsov,
S.D.Nuttall,
K.E.Ganio,
B.Roberts,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
|
Resolution Low / High (Å)
|
47.57 /
2.00
|
|
Space group
|
C 2 2 21
|
|
Cell size a, b, c (Å), α, β, γ (°)
|
162.699,
201.671,
143.834,
90.00,
90.00,
90.00
|
|
R / Rfree (%)
|
15.6 /
19
|
Other elements in 6dtk:
The structure of Heterodimers of Fals Mutant Sod Enzyme also contains other interesting chemical elements:
Zinc Binding Sites:
The binding sites of Zinc atom in the Heterodimers of Fals Mutant Sod Enzyme
(pdb code 6dtk). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 10 binding sites of Zinc where determined in the
Heterodimers of Fals Mutant Sod Enzyme, PDB code: 6dtk:
Jump to Zinc binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Zinc binding site 1 out
of 10 in 6dtk
Go back to
Zinc Binding Sites List in 6dtk
Zinc binding site 1 out
of 10 in the Heterodimers of Fals Mutant Sod Enzyme
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Heterodimers of Fals Mutant Sod Enzyme within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn401
b:49.8
occ:0.30
|
OD1
|
A:ASP83
|
2.0
|
46.2
|
0.3
|
|
ND1
|
A:HIS80
|
2.1
|
63.0
|
1.0
|
|
ND1
|
A:HIS63
|
2.1
|
56.5
|
1.0
|
|
ND1
|
A:HIS71
|
2.1
|
68.6
|
1.0
|
|
O
|
A:HOH501
|
2.2
|
91.9
|
0.7
|
|
CG
|
A:ASP83
|
2.7
|
47.2
|
0.3
|
|
OD2
|
A:ASP83
|
2.9
|
43.6
|
0.3
|
|
CE1
|
A:HIS80
|
3.0
|
63.2
|
1.0
|
|
CG
|
A:HIS80
|
3.0
|
64.8
|
1.0
|
|
CE1
|
A:HIS71
|
3.1
|
69.5
|
1.0
|
|
CG
|
A:HIS63
|
3.1
|
49.3
|
1.0
|
|
CE1
|
A:HIS63
|
3.1
|
60.0
|
1.0
|
|
CG
|
A:HIS71
|
3.2
|
68.9
|
1.0
|
|
CB
|
A:HIS63
|
3.4
|
45.2
|
1.0
|
|
CB
|
A:HIS80
|
3.5
|
64.4
|
1.0
|
|
CB
|
A:HIS71
|
3.5
|
68.5
|
1.0
|
|
OG
|
A:ASP83
|
3.6
|
57.1
|
0.7
|
|
O
|
A:LYS136
|
3.7
|
86.8
|
1.0
|
|
CA
|
A:HIS71
|
4.0
|
70.7
|
1.0
|
|
NE2
|
A:HIS80
|
4.0
|
61.9
|
1.0
|
|
CD2
|
A:HIS80
|
4.1
|
64.8
|
1.0
|
|
CB
|
A:ASP83
|
4.2
|
47.1
|
0.3
|
|
CB
|
A:ASP83
|
4.2
|
56.2
|
0.7
|
|
NE2
|
A:HIS71
|
4.2
|
70.3
|
1.0
|
|
CD2
|
A:HIS63
|
4.2
|
54.3
|
1.0
|
|
NE2
|
A:HIS63
|
4.3
|
56.5
|
1.0
|
|
CD2
|
A:HIS71
|
4.3
|
68.4
|
1.0
|
|
C
|
A:LYS136
|
4.6
|
90.2
|
1.0
|
|
CA
|
A:ASP83
|
4.7
|
54.0
|
0.7
|
|
CA
|
A:ASP83
|
4.7
|
47.8
|
0.3
|
|
CA
|
A:HIS80
|
4.7
|
64.0
|
1.0
|
|
N
|
A:HIS80
|
4.7
|
71.5
|
1.0
|
|
N
|
A:ASP83
|
4.8
|
56.3
|
0.7
|
|
N
|
A:ASP83
|
4.9
|
50.9
|
0.3
|
|
CA
|
A:HIS63
|
4.9
|
42.3
|
1.0
|
|
N
|
A:GLY72
|
4.9
|
61.0
|
1.0
|
|
O
|
A:HOH588
|
4.9
|
52.5
|
1.0
|
|
Zinc binding site 2 out
of 10 in 6dtk
Go back to
Zinc Binding Sites List in 6dtk
Zinc binding site 2 out
of 10 in the Heterodimers of Fals Mutant Sod Enzyme
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Heterodimers of Fals Mutant Sod Enzyme within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn403
b:30.2
occ:0.80
|
ND1
|
A:HIS240
|
2.0
|
29.4
|
1.0
|
|
OD1
|
A:ASP252
|
2.0
|
32.3
|
0.7
|
|
ND1
|
A:HIS232
|
2.0
|
28.9
|
1.0
|
|
ND1
|
A:HIS249
|
2.1
|
33.4
|
1.0
|
|
OG
|
A:ASP252
|
2.2
|
34.0
|
0.3
|
|
CG
|
A:ASP252
|
2.8
|
30.5
|
0.7
|
|
CE1
|
A:HIS240
|
2.9
|
31.9
|
1.0
|
|
OD2
|
A:ASP252
|
2.9
|
26.9
|
0.7
|
|
CE1
|
A:HIS232
|
2.9
|
30.9
|
1.0
|
|
CE1
|
A:HIS249
|
3.0
|
34.7
|
1.0
|
|
CG
|
A:HIS240
|
3.0
|
30.8
|
1.0
|
|
CG
|
A:HIS232
|
3.1
|
31.0
|
1.0
|
|
CG
|
A:HIS249
|
3.1
|
34.8
|
1.0
|
|
CB
|
A:HIS232
|
3.5
|
29.4
|
1.0
|
|
CB
|
A:HIS240
|
3.5
|
32.1
|
1.0
|
|
CB
|
A:HIS249
|
3.6
|
32.1
|
1.0
|
|
CB
|
A:ASP252
|
3.7
|
32.3
|
0.3
|
|
O
|
A:LYS305
|
3.8
|
32.1
|
1.0
|
|
CA
|
A:HIS240
|
3.9
|
33.3
|
1.0
|
|
NE2
|
A:HIS240
|
4.0
|
29.9
|
1.0
|
|
NE2
|
A:HIS249
|
4.1
|
34.6
|
1.0
|
|
NE2
|
A:HIS232
|
4.1
|
31.6
|
1.0
|
|
CD2
|
A:HIS240
|
4.1
|
31.5
|
1.0
|
|
CD2
|
A:HIS249
|
4.2
|
34.4
|
1.0
|
|
CD2
|
A:HIS232
|
4.2
|
31.1
|
1.0
|
|
CB
|
A:ASP252
|
4.2
|
28.4
|
0.7
|
|
CA
|
A:ASP252
|
4.5
|
31.5
|
0.3
|
|
CA
|
A:ASP252
|
4.7
|
28.5
|
0.7
|
|
C
|
A:LYS305
|
4.7
|
33.9
|
1.0
|
|
N
|
A:HIS249
|
4.7
|
30.6
|
1.0
|
|
CA
|
A:HIS249
|
4.8
|
30.7
|
1.0
|
|
N
|
A:GLY241
|
4.8
|
30.1
|
1.0
|
|
N
|
A:ASP252
|
4.9
|
31.6
|
0.3
|
|
C
|
A:HIS240
|
4.9
|
32.6
|
1.0
|
|
N
|
A:HIS240
|
4.9
|
36.8
|
1.0
|
|
N
|
A:ASP252
|
4.9
|
30.1
|
0.7
|
|
CA
|
A:HIS232
|
5.0
|
28.8
|
1.0
|
|
O
|
A:HOH606
|
5.0
|
31.1
|
1.0
|
|
Zinc binding site 3 out
of 10 in 6dtk
Go back to
Zinc Binding Sites List in 6dtk
Zinc binding site 3 out
of 10 in the Heterodimers of Fals Mutant Sod Enzyme
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 3 of Heterodimers of Fals Mutant Sod Enzyme within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Zn401
b:54.6
occ:0.50
|
ND1
|
C:HIS63
|
2.0
|
52.6
|
1.0
|
|
OD1
|
C:ASP83
|
2.0
|
50.2
|
0.3
|
|
ND1
|
C:HIS71
|
2.1
|
67.3
|
1.0
|
|
ND1
|
C:HIS80
|
2.1
|
60.1
|
1.0
|
|
OG
|
C:ASP83
|
2.2
|
62.5
|
0.7
|
|
CG
|
C:ASP83
|
2.9
|
46.1
|
0.3
|
|
CE1
|
C:HIS63
|
2.9
|
54.8
|
1.0
|
|
CE1
|
C:HIS80
|
2.9
|
58.6
|
1.0
|
|
CE1
|
C:HIS71
|
3.0
|
66.3
|
1.0
|
|
CG
|
C:HIS63
|
3.0
|
54.5
|
1.0
|
|
CG
|
C:HIS80
|
3.1
|
59.4
|
1.0
|
|
CG
|
C:HIS71
|
3.1
|
67.8
|
1.0
|
|
OD2
|
C:ASP83
|
3.2
|
43.5
|
0.3
|
|
CB
|
C:HIS63
|
3.4
|
54.0
|
1.0
|
|
CB
|
C:HIS71
|
3.5
|
64.6
|
1.0
|
|
CB
|
C:HIS80
|
3.5
|
57.5
|
1.0
|
|
CB
|
C:ASP83
|
3.7
|
59.7
|
0.7
|
|
O
|
C:LYS136
|
3.8
|
71.2
|
1.0
|
|
CA
|
C:HIS71
|
4.0
|
65.8
|
1.0
|
|
NE2
|
C:HIS80
|
4.0
|
59.5
|
1.0
|
|
NE2
|
C:HIS63
|
4.0
|
55.0
|
1.0
|
|
CD2
|
C:HIS80
|
4.1
|
58.8
|
1.0
|
|
CD2
|
C:HIS63
|
4.1
|
56.1
|
1.0
|
|
NE2
|
C:HIS71
|
4.1
|
69.2
|
1.0
|
|
CD2
|
C:HIS71
|
4.2
|
68.7
|
1.0
|
|
CB
|
C:ASP83
|
4.2
|
45.9
|
0.3
|
|
CA
|
C:ASP83
|
4.4
|
57.1
|
0.7
|
|
CA
|
C:ASP83
|
4.5
|
47.9
|
0.3
|
|
N
|
C:HIS80
|
4.7
|
60.0
|
1.0
|
|
CA
|
C:HIS80
|
4.7
|
57.9
|
1.0
|
|
N
|
C:ASP83
|
4.7
|
55.4
|
0.7
|
|
CD2
|
C:HIS46
|
4.7
|
50.7
|
1.0
|
|
N
|
C:GLY72
|
4.8
|
59.5
|
1.0
|
|
N
|
C:ASP83
|
4.8
|
48.5
|
0.3
|
|
C
|
C:LYS136
|
4.8
|
73.5
|
1.0
|
|
C
|
C:HIS71
|
4.9
|
64.1
|
1.0
|
|
CA
|
C:HIS63
|
5.0
|
54.0
|
1.0
|
|
N
|
C:HIS71
|
5.0
|
66.9
|
1.0
|
|
Zinc binding site 4 out
of 10 in 6dtk
Go back to
Zinc Binding Sites List in 6dtk
Zinc binding site 4 out
of 10 in the Heterodimers of Fals Mutant Sod Enzyme
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 4 of Heterodimers of Fals Mutant Sod Enzyme within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Zn403
b:33.3
occ:0.50
|
OD1
|
C:ASP252
|
2.0
|
42.5
|
0.7
|
|
ND1
|
C:HIS232
|
2.0
|
39.0
|
1.0
|
|
ND1
|
C:HIS249
|
2.1
|
33.3
|
1.0
|
|
ND1
|
C:HIS240
|
2.1
|
36.2
|
1.0
|
|
OG
|
C:ASP252
|
2.2
|
37.5
|
0.3
|
|
CG
|
C:ASP252
|
2.8
|
35.1
|
0.7
|
|
CE1
|
C:HIS249
|
3.0
|
33.0
|
1.0
|
|
CE1
|
C:HIS232
|
3.0
|
39.3
|
1.0
|
|
CE1
|
C:HIS240
|
3.0
|
37.1
|
1.0
|
|
CG
|
C:HIS232
|
3.0
|
37.6
|
1.0
|
|
OD2
|
C:ASP252
|
3.0
|
36.1
|
0.7
|
|
CG
|
C:HIS249
|
3.1
|
35.2
|
1.0
|
|
CG
|
C:HIS240
|
3.2
|
36.4
|
1.0
|
|
CB
|
C:HIS232
|
3.4
|
39.3
|
1.0
|
|
CB
|
C:HIS249
|
3.6
|
37.7
|
1.0
|
|
CB
|
C:HIS240
|
3.6
|
35.2
|
1.0
|
|
CB
|
C:ASP252
|
3.6
|
36.0
|
0.3
|
|
O
|
C:LYS305
|
3.7
|
37.3
|
1.0
|
|
CA
|
C:HIS240
|
4.1
|
35.7
|
1.0
|
|
NE2
|
C:HIS249
|
4.1
|
33.8
|
1.0
|
|
CB
|
C:ASP252
|
4.1
|
33.8
|
0.7
|
|
NE2
|
C:HIS232
|
4.1
|
42.1
|
1.0
|
|
CD2
|
C:HIS249
|
4.2
|
35.6
|
1.0
|
|
CD2
|
C:HIS232
|
4.2
|
41.4
|
1.0
|
|
NE2
|
C:HIS240
|
4.2
|
37.3
|
1.0
|
|
CD2
|
C:HIS240
|
4.2
|
35.0
|
1.0
|
|
CA
|
C:ASP252
|
4.3
|
36.4
|
0.3
|
|
CA
|
C:ASP252
|
4.5
|
35.0
|
0.7
|
|
N
|
C:ASP252
|
4.6
|
36.1
|
0.3
|
|
N
|
C:ASP252
|
4.7
|
34.7
|
0.7
|
|
C
|
C:LYS305
|
4.7
|
39.4
|
1.0
|
|
N
|
C:HIS249
|
4.7
|
40.2
|
1.0
|
|
CA
|
C:HIS249
|
4.8
|
38.5
|
1.0
|
|
N
|
C:GLY241
|
4.9
|
33.1
|
1.0
|
|
CA
|
C:HIS232
|
4.9
|
39.4
|
1.0
|
|
CD2
|
C:HIS215
|
4.9
|
39.0
|
1.0
|
|
O
|
C:HOH578
|
5.0
|
43.8
|
1.0
|
|
Zinc binding site 5 out
of 10 in 6dtk
Go back to
Zinc Binding Sites List in 6dtk
Zinc binding site 5 out
of 10 in the Heterodimers of Fals Mutant Sod Enzyme
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 5 of Heterodimers of Fals Mutant Sod Enzyme within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Zn401
b:29.5
occ:0.40
|
OD1
|
E:ASP83
|
2.0
|
30.3
|
0.4
|
|
ND1
|
E:HIS63
|
2.0
|
33.1
|
1.0
|
|
ND1
|
E:HIS80
|
2.0
|
36.4
|
1.0
|
|
ND1
|
E:HIS71
|
2.2
|
38.2
|
1.0
|
|
OG
|
E:ASP83
|
2.2
|
43.0
|
0.6
|
|
CG
|
E:ASP83
|
2.8
|
26.3
|
0.4
|
|
CE1
|
E:HIS80
|
2.9
|
38.8
|
1.0
|
|
CE1
|
E:HIS63
|
3.0
|
33.9
|
1.0
|
|
CG
|
E:HIS63
|
3.0
|
33.8
|
1.0
|
|
CG
|
E:HIS80
|
3.1
|
35.6
|
1.0
|
|
CE1
|
E:HIS71
|
3.1
|
41.5
|
1.0
|
|
OD2
|
E:ASP83
|
3.1
|
22.9
|
0.4
|
|
CG
|
E:HIS71
|
3.2
|
41.3
|
1.0
|
|
CB
|
E:HIS63
|
3.4
|
31.3
|
1.0
|
|
CB
|
E:HIS80
|
3.5
|
33.5
|
1.0
|
|
CB
|
E:HIS71
|
3.5
|
39.8
|
1.0
|
|
CB
|
E:ASP83
|
3.7
|
38.1
|
0.6
|
|
O
|
E:LYS136
|
3.9
|
43.7
|
1.0
|
|
CA
|
E:HIS71
|
4.0
|
39.5
|
1.0
|
|
NE2
|
E:HIS80
|
4.0
|
37.4
|
1.0
|
|
CD2
|
E:HIS80
|
4.1
|
39.5
|
1.0
|
|
CD2
|
E:HIS63
|
4.2
|
35.7
|
1.0
|
|
NE2
|
E:HIS63
|
4.2
|
38.0
|
1.0
|
|
CB
|
E:ASP83
|
4.2
|
26.5
|
0.4
|
|
NE2
|
E:HIS71
|
4.2
|
43.9
|
1.0
|
|
CD2
|
E:HIS71
|
4.3
|
41.2
|
1.0
|
|
CA
|
E:ASP83
|
4.4
|
34.0
|
0.6
|
|
CA
|
E:ASP83
|
4.6
|
27.4
|
0.4
|
|
N
|
E:HIS80
|
4.6
|
32.6
|
1.0
|
|
CA
|
E:HIS80
|
4.7
|
31.7
|
1.0
|
|
N
|
E:ASP83
|
4.7
|
33.2
|
0.6
|
|
N
|
E:ASP83
|
4.7
|
28.3
|
0.4
|
|
C
|
E:LYS136
|
4.8
|
49.2
|
1.0
|
|
N
|
E:GLY72
|
4.8
|
38.9
|
1.0
|
|
CA
|
E:HIS63
|
4.9
|
28.5
|
1.0
|
|
N
|
E:HIS71
|
5.0
|
40.3
|
1.0
|
|
C
|
E:HIS71
|
5.0
|
39.8
|
1.0
|
|
Zinc binding site 6 out
of 10 in 6dtk
Go back to
Zinc Binding Sites List in 6dtk
Zinc binding site 6 out
of 10 in the Heterodimers of Fals Mutant Sod Enzyme
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 6 of Heterodimers of Fals Mutant Sod Enzyme within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Zn403
b:25.4
occ:0.70
|
OD1
|
E:ASP252
|
2.0
|
23.6
|
0.6
|
|
ND1
|
E:HIS232
|
2.0
|
23.7
|
1.0
|
|
ND1
|
E:HIS249
|
2.1
|
21.2
|
1.0
|
|
ND1
|
E:HIS240
|
2.1
|
23.8
|
1.0
|
|
OG
|
E:ASP252
|
2.2
|
30.0
|
0.4
|
|
CG
|
E:ASP252
|
2.8
|
19.8
|
0.6
|
|
CE1
|
E:HIS232
|
2.9
|
24.3
|
1.0
|
|
CE1
|
E:HIS249
|
2.9
|
22.3
|
1.0
|
|
OD2
|
E:ASP252
|
3.0
|
16.4
|
0.6
|
|
CE1
|
E:HIS240
|
3.0
|
25.2
|
1.0
|
|
CG
|
E:HIS232
|
3.0
|
23.7
|
1.0
|
|
CG
|
E:HIS249
|
3.1
|
22.5
|
1.0
|
|
CG
|
E:HIS240
|
3.2
|
22.9
|
1.0
|
|
CB
|
E:HIS232
|
3.4
|
22.4
|
1.0
|
|
CB
|
E:HIS249
|
3.6
|
22.4
|
1.0
|
|
CB
|
E:HIS240
|
3.6
|
22.8
|
1.0
|
|
CB
|
E:ASP252
|
3.7
|
24.9
|
0.4
|
|
O
|
E:LYS305
|
3.7
|
23.3
|
1.0
|
|
CA
|
E:HIS240
|
4.0
|
23.3
|
1.0
|
|
NE2
|
E:HIS249
|
4.1
|
24.6
|
1.0
|
|
NE2
|
E:HIS232
|
4.1
|
26.0
|
1.0
|
|
CD2
|
E:HIS232
|
4.1
|
25.0
|
1.0
|
|
NE2
|
E:HIS240
|
4.1
|
22.0
|
1.0
|
|
CD2
|
E:HIS249
|
4.1
|
22.4
|
1.0
|
|
CB
|
E:ASP252
|
4.2
|
18.8
|
0.6
|
|
CD2
|
E:HIS240
|
4.2
|
21.4
|
1.0
|
|
CA
|
E:ASP252
|
4.3
|
23.4
|
0.4
|
|
CA
|
E:ASP252
|
4.6
|
19.6
|
0.6
|
|
N
|
E:ASP252
|
4.7
|
22.5
|
0.4
|
|
C
|
E:LYS305
|
4.7
|
26.0
|
1.0
|
|
N
|
E:HIS249
|
4.8
|
22.6
|
1.0
|
|
N
|
E:ASP252
|
4.8
|
19.6
|
0.6
|
|
CA
|
E:HIS249
|
4.8
|
23.1
|
1.0
|
|
CD2
|
E:HIS215
|
4.9
|
21.4
|
1.0
|
|
N
|
E:GLY241
|
4.9
|
21.9
|
1.0
|
|
CA
|
E:HIS232
|
4.9
|
21.2
|
1.0
|
|
O
|
E:HOH684
|
4.9
|
26.9
|
1.0
|
|
N
|
E:HIS240
|
5.0
|
25.1
|
1.0
|
|
C
|
E:HIS240
|
5.0
|
25.6
|
1.0
|
|
Zinc binding site 7 out
of 10 in 6dtk
Go back to
Zinc Binding Sites List in 6dtk
Zinc binding site 7 out
of 10 in the Heterodimers of Fals Mutant Sod Enzyme
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 7 of Heterodimers of Fals Mutant Sod Enzyme within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
G:Zn401
b:26.5
occ:0.70
|
ND1
|
G:HIS63
|
2.0
|
25.0
|
1.0
|
|
OD1
|
G:ASP83
|
2.0
|
19.3
|
0.5
|
|
ND1
|
G:HIS80
|
2.0
|
21.4
|
1.0
|
|
ND1
|
G:HIS71
|
2.1
|
24.8
|
1.0
|
|
CG
|
G:ASP83
|
2.8
|
18.9
|
0.5
|
|
CE1
|
G:HIS80
|
2.9
|
23.2
|
1.0
|
|
CE1
|
G:HIS63
|
2.9
|
26.5
|
1.0
|
|
OG
|
G:ASP83
|
2.9
|
25.4
|
0.6
|
|
OD2
|
G:ASP83
|
3.0
|
15.2
|
0.5
|
|
CG
|
G:HIS63
|
3.0
|
24.5
|
1.0
|
|
CE1
|
G:HIS71
|
3.0
|
25.9
|
1.0
|
|
CG
|
G:HIS80
|
3.1
|
22.7
|
1.0
|
|
CG
|
G:HIS71
|
3.2
|
23.6
|
1.0
|
|
CB
|
G:HIS63
|
3.3
|
22.3
|
1.0
|
|
CB
|
G:HIS80
|
3.6
|
22.3
|
1.0
|
|
CB
|
G:HIS71
|
3.6
|
22.9
|
1.0
|
|
O
|
G:LYS136
|
3.7
|
26.4
|
1.0
|
|
CA
|
G:HIS71
|
4.0
|
23.4
|
1.0
|
|
NE2
|
G:HIS80
|
4.0
|
21.6
|
1.0
|
|
NE2
|
G:HIS63
|
4.1
|
27.5
|
1.0
|
|
CD2
|
G:HIS63
|
4.1
|
26.3
|
1.0
|
|
CB
|
G:ASP83
|
4.1
|
24.0
|
0.6
|
|
CD2
|
G:HIS80
|
4.1
|
22.8
|
1.0
|
|
NE2
|
G:HIS71
|
4.2
|
24.1
|
1.0
|
|
CB
|
G:ASP83
|
4.2
|
19.4
|
0.5
|
|
CD2
|
G:HIS71
|
4.3
|
23.5
|
1.0
|
|
CA
|
G:ASP83
|
4.5
|
23.9
|
0.6
|
|
CA
|
G:ASP83
|
4.6
|
21.0
|
0.5
|
|
C
|
G:LYS136
|
4.7
|
27.4
|
1.0
|
|
N
|
G:HIS80
|
4.8
|
23.7
|
1.0
|
|
CA
|
G:HIS80
|
4.8
|
22.3
|
1.0
|
|
N
|
G:ASP83
|
4.8
|
23.7
|
0.6
|
|
N
|
G:ASP83
|
4.8
|
21.6
|
0.5
|
|
O
|
G:HOH613
|
4.9
|
26.4
|
1.0
|
|
CA
|
G:HIS63
|
4.9
|
22.0
|
1.0
|
|
N
|
G:GLY72
|
5.0
|
21.1
|
1.0
|
|
CD2
|
G:HIS46
|
5.0
|
23.4
|
1.0
|
|
N
|
G:HIS71
|
5.0
|
23.9
|
1.0
|
|
Zinc binding site 8 out
of 10 in 6dtk
Go back to
Zinc Binding Sites List in 6dtk
Zinc binding site 8 out
of 10 in the Heterodimers of Fals Mutant Sod Enzyme
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 8 of Heterodimers of Fals Mutant Sod Enzyme within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
G:Zn403
b:34.7
occ:0.55
|
ND1
|
G:HIS232
|
1.9
|
31.3
|
1.0
|
|
OD1
|
G:ASP252
|
2.0
|
29.8
|
0.6
|
|
ND1
|
G:HIS249
|
2.0
|
31.4
|
1.0
|
|
ND1
|
G:HIS240
|
2.2
|
35.8
|
1.0
|
|
CG
|
G:ASP252
|
2.7
|
27.2
|
0.6
|
|
OD2
|
G:ASP252
|
2.8
|
27.1
|
0.6
|
|
CE1
|
G:HIS232
|
2.9
|
34.3
|
1.0
|
|
CE1
|
G:HIS249
|
2.9
|
31.8
|
1.0
|
|
CG
|
G:HIS232
|
3.0
|
31.9
|
1.0
|
|
CG
|
G:HIS249
|
3.1
|
31.0
|
1.0
|
|
OG
|
G:ASP252
|
3.1
|
27.9
|
0.5
|
|
CE1
|
G:HIS240
|
3.1
|
39.6
|
1.0
|
|
CG
|
G:HIS240
|
3.1
|
35.8
|
1.0
|
|
CB
|
G:HIS232
|
3.3
|
30.1
|
1.0
|
|
CB
|
G:HIS240
|
3.4
|
33.9
|
1.0
|
|
CB
|
G:HIS249
|
3.5
|
29.4
|
1.0
|
|
O
|
G:LYS305
|
3.6
|
36.7
|
1.0
|
|
CA
|
G:HIS240
|
3.9
|
32.7
|
1.0
|
|
NE2
|
G:HIS249
|
4.0
|
30.6
|
1.0
|
|
NE2
|
G:HIS232
|
4.1
|
35.6
|
1.0
|
|
CD2
|
G:HIS232
|
4.1
|
34.3
|
1.0
|
|
CB
|
G:ASP252
|
4.1
|
27.1
|
0.5
|
|
CD2
|
G:HIS249
|
4.1
|
31.7
|
1.0
|
|
CB
|
G:ASP252
|
4.2
|
26.4
|
0.6
|
|
NE2
|
G:HIS240
|
4.2
|
36.8
|
1.0
|
|
CD2
|
G:HIS240
|
4.2
|
34.3
|
1.0
|
|
CA
|
G:ASP252
|
4.5
|
27.8
|
0.5
|
|
CA
|
G:ASP252
|
4.6
|
27.1
|
0.6
|
|
C
|
G:LYS305
|
4.6
|
40.0
|
1.0
|
|
N
|
G:ASP252
|
4.6
|
27.5
|
0.5
|
|
N
|
G:HIS249
|
4.7
|
29.7
|
1.0
|
|
O
|
G:HOH607
|
4.7
|
29.5
|
1.0
|
|
CA
|
G:HIS249
|
4.7
|
29.8
|
1.0
|
|
N
|
G:ASP252
|
4.8
|
26.6
|
0.6
|
|
N
|
G:HIS240
|
4.8
|
33.4
|
1.0
|
|
CA
|
G:HIS232
|
4.9
|
27.8
|
1.0
|
|
N
|
G:GLY241
|
5.0
|
33.1
|
1.0
|
|
C
|
G:HIS240
|
5.0
|
37.9
|
1.0
|
|
Zinc binding site 9 out
of 10 in 6dtk
Go back to
Zinc Binding Sites List in 6dtk
Zinc binding site 9 out
of 10 in the Heterodimers of Fals Mutant Sod Enzyme
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 9 of Heterodimers of Fals Mutant Sod Enzyme within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
I:Zn401
b:23.1
occ:0.70
|
ND1
|
I:HIS63
|
1.9
|
23.9
|
1.0
|
|
OD1
|
I:ASP83
|
2.0
|
18.5
|
0.5
|
|
ND1
|
I:HIS71
|
2.1
|
25.4
|
1.0
|
|
ND1
|
I:HIS80
|
2.1
|
21.6
|
1.0
|
|
OG
|
I:ASP83
|
2.2
|
32.3
|
0.6
|
|
CG
|
I:ASP83
|
2.8
|
16.8
|
0.5
|
|
CE1
|
I:HIS63
|
2.9
|
25.0
|
1.0
|
|
CE1
|
I:HIS71
|
3.0
|
25.6
|
1.0
|
|
OD2
|
I:ASP83
|
3.0
|
12.2
|
0.5
|
|
CG
|
I:HIS63
|
3.0
|
23.5
|
1.0
|
|
CE1
|
I:HIS80
|
3.0
|
23.6
|
1.0
|
|
CG
|
I:HIS71
|
3.1
|
23.1
|
1.0
|
|
CG
|
I:HIS80
|
3.1
|
21.7
|
1.0
|
|
CB
|
I:HIS63
|
3.4
|
22.5
|
1.0
|
|
CB
|
I:HIS71
|
3.5
|
23.1
|
1.0
|
|
CB
|
I:HIS80
|
3.6
|
22.6
|
1.0
|
|
CB
|
I:ASP83
|
3.7
|
27.1
|
0.6
|
|
O
|
I:LYS136
|
3.8
|
25.0
|
1.0
|
|
CA
|
I:HIS71
|
4.0
|
23.2
|
1.0
|
|
NE2
|
I:HIS63
|
4.0
|
26.1
|
1.0
|
|
CD2
|
I:HIS63
|
4.1
|
25.7
|
1.0
|
|
NE2
|
I:HIS80
|
4.1
|
20.2
|
1.0
|
|
NE2
|
I:HIS71
|
4.1
|
22.7
|
1.0
|
|
CD2
|
I:HIS80
|
4.2
|
22.1
|
1.0
|
|
CD2
|
I:HIS71
|
4.2
|
22.4
|
1.0
|
|
CB
|
I:ASP83
|
4.2
|
16.9
|
0.5
|
|
CA
|
I:ASP83
|
4.4
|
24.0
|
0.6
|
|
CA
|
I:ASP83
|
4.6
|
18.3
|
0.5
|
|
C
|
I:LYS136
|
4.7
|
26.0
|
1.0
|
|
N
|
I:HIS80
|
4.8
|
21.8
|
1.0
|
|
CA
|
I:HIS80
|
4.8
|
22.8
|
1.0
|
|
N
|
I:ASP83
|
4.8
|
23.9
|
0.6
|
|
N
|
I:GLY72
|
4.9
|
22.0
|
1.0
|
|
N
|
I:ASP83
|
4.9
|
19.8
|
0.5
|
|
CD2
|
I:HIS46
|
4.9
|
21.2
|
1.0
|
|
CA
|
I:HIS63
|
4.9
|
22.2
|
1.0
|
|
O
|
I:HOH628
|
5.0
|
27.1
|
1.0
|
|
C
|
I:HIS71
|
5.0
|
23.0
|
1.0
|
|
N
|
I:HIS71
|
5.0
|
24.1
|
1.0
|
|
Zinc binding site 10 out
of 10 in 6dtk
Go back to
Zinc Binding Sites List in 6dtk
Zinc binding site 10 out
of 10 in the Heterodimers of Fals Mutant Sod Enzyme
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 10 of Heterodimers of Fals Mutant Sod Enzyme within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
I:Zn403
b:43.0
occ:0.50
|
OD1
|
I:ASP252
|
2.0
|
44.4
|
0.6
|
|
ND1
|
I:HIS249
|
2.1
|
47.7
|
1.0
|
|
ND1
|
I:HIS240
|
2.2
|
58.1
|
1.0
|
|
ND1
|
I:HIS232
|
2.2
|
47.5
|
1.0
|
|
OG
|
I:ASP252
|
2.2
|
48.2
|
0.5
|
|
CG
|
I:ASP252
|
2.9
|
40.1
|
0.6
|
|
O
|
I:HOH517
|
3.1
|
69.5
|
0.5
|
|
CE1
|
I:HIS249
|
3.1
|
51.1
|
1.0
|
|
CE1
|
I:HIS240
|
3.1
|
60.6
|
1.0
|
|
CG
|
I:HIS249
|
3.1
|
48.9
|
1.0
|
|
CE1
|
I:HIS232
|
3.2
|
50.8
|
1.0
|
|
CG
|
I:HIS232
|
3.2
|
43.2
|
1.0
|
|
CG
|
I:HIS240
|
3.2
|
61.0
|
1.0
|
|
OD2
|
I:ASP252
|
3.2
|
39.3
|
0.6
|
|
CB
|
I:HIS249
|
3.4
|
46.6
|
1.0
|
|
CB
|
I:HIS232
|
3.4
|
37.9
|
1.0
|
|
CB
|
I:HIS240
|
3.6
|
62.7
|
1.0
|
|
CB
|
I:ASP252
|
3.6
|
44.9
|
0.5
|
|
O
|
I:LYS305
|
4.0
|
62.4
|
1.0
|
|
CA
|
I:HIS240
|
4.1
|
61.6
|
1.0
|
|
NE2
|
I:HIS249
|
4.2
|
48.8
|
1.0
|
|
CD2
|
I:HIS249
|
4.2
|
51.2
|
1.0
|
|
CB
|
I:ASP252
|
4.2
|
38.0
|
0.6
|
|
NE2
|
I:HIS240
|
4.2
|
67.3
|
1.0
|
|
CD2
|
I:HIS232
|
4.3
|
48.6
|
1.0
|
|
NE2
|
I:HIS232
|
4.3
|
50.5
|
1.0
|
|
CD2
|
I:HIS240
|
4.3
|
63.0
|
1.0
|
|
CA
|
I:ASP252
|
4.4
|
41.9
|
0.5
|
|
CA
|
I:ASP252
|
4.5
|
37.6
|
0.6
|
|
N
|
I:ASP252
|
4.6
|
41.1
|
0.5
|
|
CA
|
I:HIS249
|
4.7
|
45.1
|
1.0
|
|
N
|
I:HIS249
|
4.7
|
47.6
|
1.0
|
|
N
|
I:ASP252
|
4.7
|
37.6
|
0.6
|
|
C
|
I:LYS305
|
5.0
|
72.2
|
1.0
|
|
CA
|
I:HIS232
|
5.0
|
34.2
|
1.0
|
|
Reference:
V.A.Streltsov,
S.D.Nuttall,
K.E.Ganio,
B.Roberts.
Structural Characterization of Heterodimers of Fals Mutant Sod Enzyme To Be Published.
Page generated: Mon Oct 28 19:47:21 2024
|
