Zinc in PDB 6auf: Crystal Structure of Metalo Beta Lactamases Mim-1 From Novosphingobium Pentaromativorans

The structure of Crystal Structure of Metalo Beta Lactamases Mim-1 From Novosphingobium Pentaromativorans, PDB code: 6auf was solved by C.Selleck, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	33.98 / 2.60
Space group	P 41 21 2
Cell size a, b, c (Å), α, β, γ (°)	67.961, 67.961, 216.670, 90.00, 90.00, 90.00
R / Rfree (%)	17.3 / 21.9

The binding sites of Zinc atom in the Crystal Structure of Metalo Beta Lactamases Mim-1 From Novosphingobium Pentaromativorans (pdb code 6auf). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of Metalo Beta Lactamases Mim-1 From Novosphingobium Pentaromativorans, PDB code: 6auf:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Crystal Structure of Metalo Beta Lactamases Mim-1 From Novosphingobium Pentaromativorans


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Metalo Beta Lactamases Mim-1 From Novosphingobium Pentaromativorans within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn401 b:63.8 occ:1.00 O5 B:CIT403 1.9 61.1 1.0 NE2 B:HIS121 2.0 74.1 1.0 NE2 B:HIS260 2.0 69.9 1.0 C6 B:CIT403 2.1 61.4 1.0 O6 B:CIT403 2.1 67.0 1.0 O2 B:CIT403 2.2 57.1 1.0 OD2 B:ASP120 2.3 54.3 1.0 CD2 B:HIS260 2.9 60.2 1.0 CE1 B:HIS121 2.9 67.0 1.0 CD2 B:HIS121 2.9 65.8 1.0 CE1 B:HIS260 3.1 64.9 1.0 C1 B:CIT403 3.1 54.7 1.0 C3 B:CIT403 3.3 57.3 1.0 CG B:ASP120 3.6 74.3 1.0 C2 B:CIT403 3.6 50.6 1.0 H22 B:CIT403 3.8 60.7 1.0 ND1 B:HIS121 4.0 69.5 1.0 ZN B:ZN402 4.0 53.9 1.0 O7 B:CIT403 4.0 49.9 1.0 CG B:HIS121 4.0 66.4 1.0 CE1 B:HIS116 4.0 49.1 1.0 CG B:HIS260 4.1 67.4 1.0 ND1 B:HIS260 4.1 60.5 1.0 O1 B:CIT403 4.2 57.4 1.0 OG B:SER220 4.2 65.0 1.0 OD1 B:ASP120 4.2 81.2 1.0 H42 B:CIT403 4.2 67.6 1.0 NE2 B:HIS116 4.3 58.8 1.0 C4 B:CIT403 4.4 56.3 1.0 H21 B:CIT403 4.5 60.7 1.0 CD1 B:ILE70 4.6 59.2 1.0 CB B:ASP120 4.7 72.7 1.0 O4 B:CIT403 4.7 61.2 1.0 HO7 B:CIT403 4.8 59.8 1.0

Zinc binding site 2 out of 2 in the Crystal Structure of Metalo Beta Lactamases Mim-1 From Novosphingobium Pentaromativorans


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of Metalo Beta Lactamases Mim-1 From Novosphingobium Pentaromativorans within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn402 b:53.9 occ:1.00 ND1 B:HIS118 1.9 59.9 1.0 NE2 B:HIS194 2.1 58.3 1.0 NE2 B:HIS116 2.1 58.8 1.0 O5 B:CIT403 2.6 61.1 1.0 O7 B:CIT403 2.7 49.9 1.0 CE1 B:HIS118 2.7 51.6 1.0 CE1 B:HIS116 2.9 49.1 1.0 CE1 B:HIS194 3.0 43.0 1.0 CG B:HIS118 3.0 64.1 1.0 CD2 B:HIS116 3.1 58.6 1.0 CD2 B:HIS194 3.1 50.7 1.0 HO7 B:CIT403 3.3 59.8 1.0 C6 B:CIT403 3.5 61.4 1.0 O2 B:CIT403 3.6 57.1 1.0 CB B:HIS118 3.6 54.2 1.0 C3 B:CIT403 3.7 57.3 1.0 NE2 B:HIS118 3.9 53.4 1.0 ND1 B:HIS116 3.9 52.5 1.0 ZN B:ZN401 4.0 63.8 1.0 CG B:HIS116 4.1 57.2 1.0 CD2 B:HIS118 4.1 57.5 1.0 ND1 B:HIS194 4.1 52.4 1.0 C1 B:CIT403 4.2 54.7 1.0 CG B:HIS194 4.2 46.5 1.0 NE2 B:GLN157 4.3 73.8 1.0 CD2 B:HIS121 4.3 65.8 1.0 C2 B:CIT403 4.4 50.6 1.0 NE2 B:HIS121 4.5 74.1 1.0 OD1 B:ASP120 4.6 81.2 1.0 OD2 B:ASP120 4.6 54.3 1.0 H21 B:CIT403 4.7 60.7 1.0 O6 B:CIT403 4.7 67.0 1.0 CA B:HIS118 5.0 57.2 1.0

C.Selleck, C.Selleck. N/A N/A.