Zinc in PDB 5wep: Crystal Structure of Fosfomycin Resistance Protein FOSA3 with Inhibitor (ANY1) Bound

The structure of Crystal Structure of Fosfomycin Resistance Protein FOSA3 with Inhibitor (ANY1) Bound, PDB code: 5wep was solved by E.H.Klontz, E.J.Sundberg, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	28.93 / 3.50
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	73.181, 73.181, 123.818, 90.00, 90.00, 90.00
R / Rfree (%)	21.4 / 25.9

The structure of Crystal Structure of Fosfomycin Resistance Protein FOSA3 with Inhibitor (ANY1) Bound also contains other interesting chemical elements:

Bromine

(Br)

4 atoms

The binding sites of Zinc atom in the Crystal Structure of Fosfomycin Resistance Protein FOSA3 with Inhibitor (ANY1) Bound (pdb code 5wep). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of Fosfomycin Resistance Protein FOSA3 with Inhibitor (ANY1) Bound, PDB code: 5wep:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Crystal Structure of Fosfomycin Resistance Protein FOSA3 with Inhibitor (ANY1) Bound


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Fosfomycin Resistance Protein FOSA3 with Inhibitor (ANY1) Bound within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn202 b:0.4 occ:1.00 O17 B:A81201 2.0 0.8 1.0 OE1 A:GLU113 2.2 0.1 1.0 NE2 A:HIS67 2.3 0.2 1.0 C16 B:A81201 2.7 0.1 1.0 CE1 A:HIS67 2.8 0.8 1.0 OE2 A:GLU113 2.8 0.3 1.0 NE2 B:HIS7 2.8 88.4 1.0 CD A:GLU113 2.8 0.4 1.0 CE1 B:HIS7 3.4 99.4 1.0 N15 B:A81201 3.4 0.6 1.0 CD2 A:HIS67 3.5 96.6 1.0 OG1 B:THR9 3.6 97.6 1.0 C18 B:A81201 3.7 1.0 1.0 CD2 B:HIS7 3.9 98.2 1.0 OH A:TYR103 4.0 0.7 1.0 ND1 A:HIS67 4.0 0.1 1.0 OH A:TYR65 4.0 0.6 1.0 CG A:GLU113 4.3 0.8 1.0 CZ A:TYR103 4.3 0.1 1.0 CG A:HIS67 4.4 92.7 1.0 BR2 B:A81201 4.4 0.6 1.0 CE2 A:TYR103 4.6 0.7 1.0 N13 B:A81201 4.6 0.7 1.0 ND1 B:HIS7 4.6 97.7 1.0 CB B:THR9 4.7 0.5 1.0 C12 B:A81201 4.7 0.9 1.0 CB A:GLU113 4.8 0.3 1.0 CZ A:TYR65 4.8 92.6 1.0 CG B:HIS7 4.9 0.8 1.0 CE2 A:TYR65 4.9 92.3 1.0

Zinc binding site 2 out of 2 in the Crystal Structure of Fosfomycin Resistance Protein FOSA3 with Inhibitor (ANY1) Bound


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of Fosfomycin Resistance Protein FOSA3 with Inhibitor (ANY1) Bound within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn202 b:95.4 occ:1.00 OE1 B:GLU113 2.1 0.0 1.0 O28 A:A81201 2.2 99.5 1.0 NE2 A:HIS7 2.4 0.0 1.0 NE2 B:HIS67 2.4 0.6 1.0 OE2 B:GLU113 2.8 0.6 1.0 CD B:GLU113 2.8 0.6 1.0 CE1 A:HIS7 2.9 0.3 1.0 C27 A:A81201 2.9 97.5 1.0 CE1 B:HIS67 3.1 97.3 1.0 CD2 B:HIS67 3.6 98.1 1.0 OG1 A:THR9 3.6 0.1 1.0 CD2 A:HIS7 3.6 0.3 1.0 C29 A:A81201 3.7 0.3 1.0 N26 A:A81201 3.8 95.8 1.0 OH B:TYR103 3.9 0.8 1.0 CE1 B:TYR103 4.0 0.3 1.0 BR A:A81201 4.1 0.4 1.0 ND1 A:HIS7 4.1 0.7 1.0 CG B:GLU113 4.2 0.4 1.0 ND1 B:HIS67 4.3 95.5 1.0 CZ B:TYR103 4.4 0.4 1.0 CG A:HIS7 4.5 0.8 1.0 OH B:TYR65 4.5 0.7 1.0 CG B:HIS67 4.6 0.5 1.0 CB A:THR9 4.7 95.7 1.0 C23 A:A81201 4.8 96.7 1.0 CB B:GLU113 4.8 0.4 1.0 N24 A:A81201 4.9 95.5 1.0 CB B:ALA69 5.0 1.0 1.0

A.D.Tomich, E.H.Klontz, D.Deredge, J.P.Barnard, C.L.Mcelheny, M.L.Eshbach, O.A.Weisz, P.Wintrode, Y.Doi, E.J.Sundberg, N.Sluis-Cremer. Small-Molecule Inhibitor of Fosa Expands Fosfomycin Activity to Multidrug-Resistant Gram-Negative Pathogens. Antimicrob. Agents V. 63 2019CHEMOTHER..
ISSN: ESSN 1098-6596
PubMed: 30642934
DOI: 10.1128/AAC.01524-18