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Zinc in PDB 5tkq: Crystal Structure of Human 3HAO with Zinc Bound in the Active Site

Enzymatic activity of Crystal Structure of Human 3HAO with Zinc Bound in the Active Site

All present enzymatic activity of Crystal Structure of Human 3HAO with Zinc Bound in the Active Site:
1.13.11.6;

Protein crystallography data

The structure of Crystal Structure of Human 3HAO with Zinc Bound in the Active Site, PDB code: 5tkq was solved by L.S.Pidugu, E.A.Toth, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.15 / 1.75
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 57.336, 57.336, 417.100, 90.00, 90.00, 120.00
R / Rfree (%) 20.2 / 22.4

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Human 3HAO with Zinc Bound in the Active Site (pdb code 5tkq). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Human 3HAO with Zinc Bound in the Active Site, PDB code: 5tkq:

Zinc binding site 1 out of 1 in 5tkq

Go back to Zinc Binding Sites List in 5tkq
Zinc binding site 1 out of 1 in the Crystal Structure of Human 3HAO with Zinc Bound in the Active Site


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Human 3HAO with Zinc Bound in the Active Site within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn301

b:22.1
occ:1.00
O A:HOH491 1.9 20.4 1.0
NE2 A:HIS91 2.0 17.0 1.0
OE1 A:GLU53 2.1 21.9 1.0
ND1 A:HIS47 2.1 19.4 1.0
O A:HOH544 2.2 17.9 1.0
OE2 A:GLU53 2.4 23.4 1.0
CD A:GLU53 2.5 24.8 1.0
CE1 A:HIS91 3.0 17.8 1.0
CE1 A:HIS47 3.0 19.0 1.0
CD2 A:HIS91 3.1 18.1 1.0
CG A:HIS47 3.3 19.5 1.0
CB A:HIS47 3.7 17.1 1.0
O A:HOH560 3.8 23.8 1.0
CG A:GLU53 4.0 16.4 1.0
ND1 A:HIS91 4.1 19.8 1.0
OE1 A:GLU105 4.2 25.7 1.0
CG A:HIS91 4.2 18.4 1.0
NE2 A:HIS47 4.2 19.5 1.0
CD2 A:HIS47 4.3 20.2 1.0
O A:HOH568 4.3 27.8 1.0
OE2 A:GLU49 4.5 19.4 1.0
CD2 A:LEU137 4.8 33.2 1.0
O A:HOH508 4.9 33.3 1.0
CG A:GLU49 4.9 18.5 1.0

Reference:

L.S.Pidugu, H.Neu, T.L.Wong, E.Pozharski, J.L.Molloy, S.L.Michel, E.A.Toth. Crystal Structures of Human 3-Hydroxyanthranilate 3,4-Dioxygenase with Native and Non-Native Metals Bound in the Active Site. Acta Crystallogr D Struct V. 73 340 2017BIOL.
ISSN: ISSN 2059-7983
PubMed: 28375145
DOI: 10.1107/S2059798317002029
Page generated: Mon Oct 28 08:38:14 2024

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