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Zinc in PDB 5jmz: Carbonic Anhydrase IX-Mimic in Complex with U-NO2

Enzymatic activity of Carbonic Anhydrase IX-Mimic in Complex with U-NO2

All present enzymatic activity of Carbonic Anhydrase IX-Mimic in Complex with U-NO2:
4.2.1.1;

Protein crystallography data

The structure of Carbonic Anhydrase IX-Mimic in Complex with U-NO2, PDB code: 5jmz was solved by R.Mckenna, M.Y.Mboge, B.P.Mahon, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.92 / 1.90
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 42.018, 41.410, 72.070, 90.00, 103.72, 90.00
R / Rfree (%) 16.2 / 19.5

Zinc Binding Sites:

The binding sites of Zinc atom in the Carbonic Anhydrase IX-Mimic in Complex with U-NO2 (pdb code 5jmz). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Carbonic Anhydrase IX-Mimic in Complex with U-NO2, PDB code: 5jmz:

Zinc binding site 1 out of 1 in 5jmz

Go back to Zinc Binding Sites List in 5jmz
Zinc binding site 1 out of 1 in the Carbonic Anhydrase IX-Mimic in Complex with U-NO2


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Carbonic Anhydrase IX-Mimic in Complex with U-NO2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn301

b:14.8
occ:1.00
N1 A:AYX303 1.9 18.2 1.0
NE2 A:HIS94 2.0 15.8 1.0
ND1 A:HIS119 2.1 9.1 1.0
NE2 A:HIS96 2.1 12.8 1.0
CD2 A:HIS94 2.9 11.6 1.0
CE1 A:HIS119 2.9 12.5 1.0
S1 A:AYX303 3.0 20.3 1.0
CD2 A:HIS96 3.0 12.0 1.0
O2 A:AYX303 3.0 15.2 1.0
CE1 A:HIS94 3.0 15.9 1.0
CE1 A:HIS96 3.1 18.3 1.0
CG A:HIS119 3.1 13.3 1.0
CB A:HIS119 3.6 10.4 1.0
O A:HOH505 3.7 20.0 1.0
OG1 A:THR199 3.8 11.7 1.0
OE1 A:GLU106 4.0 12.8 1.0
O1 A:AYX303 4.1 15.5 1.0
CG A:HIS94 4.1 11.0 1.0
NE2 A:HIS119 4.1 10.5 1.0
ND1 A:HIS94 4.1 14.3 1.0
CG A:HIS96 4.2 11.6 1.0
ND1 A:HIS96 4.2 12.0 1.0
CD2 A:HIS119 4.2 13.1 1.0
C1 A:AYX303 4.3 20.2 1.0
O A:HOH562 4.8 24.4 1.0
CD A:GLU106 4.9 16.2 1.0
C2 A:AYX303 4.9 22.3 1.0

Reference:

R.Mckenna, M.Y.Mboge, B.P.Mahon. Carbonic Anhydrase IX-Mimic in Complex with U-NO2 To Be Published.
Page generated: Sun Oct 27 19:09:36 2024

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