Zinc in PDB 5ftx: Structure of Surface Layer Protein Sbsc, Domains 4-9

The structure of Structure of Surface Layer Protein Sbsc, Domains 4-9, PDB code: 5ftx was solved by A.Dordic, T.Pavkov-Keller, M.Eder, E.M.Egelseer, K.Davis, D.Mills, U.B.Sleytr, W.Kuehlbrandt, J.Vonck, W.Keller, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	33.04 / 4.10
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	100.627, 48.128, 196.136, 90.00, 96.60, 90.00
R / Rfree (%)	20.3 / 26.8

The structure of Structure of Surface Layer Protein Sbsc, Domains 4-9 also contains other interesting chemical elements:

Calcium

(Ca)

5 atoms

The binding sites of Zinc atom in the Structure of Surface Layer Protein Sbsc, Domains 4-9 (pdb code 5ftx). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Structure of Surface Layer Protein Sbsc, Domains 4-9, PDB code: 5ftx:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Structure of Surface Layer Protein Sbsc, Domains 4-9


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of Surface Layer Protein Sbsc, Domains 4-9 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn2106 b:0.7 occ:1.00 OD1 A:ASP884 2.0 0.5 1.0 CG A:ASP884 2.0 95.3 1.0 OD2 A:ASP884 2.0 85.3 1.0 CB A:ASP884 3.2 0.0 1.0 HB3 A:ASP884 3.3 0.2 1.0 HB2 A:ASP884 3.5 0.2 1.0 HA A:ASP884 4.5 0.3 1.0 CA A:ASP884 4.5 0.3 1.0 HG1 A:THR882 4.8 0.0 1.0 H A:ASP884 4.9 0.9 1.0

Zinc binding site 2 out of 2 in the Structure of Surface Layer Protein Sbsc, Domains 4-9


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Structure of Surface Layer Protein Sbsc, Domains 4-9 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn2107 b:0.6 occ:1.00 OD1 A:ASP922 2.0 0.7 1.0 OD2 A:ASP922 2.0 87.1 1.0 CG A:ASP922 2.3 0.9 1.0 H A:ASP923 3.6 0.2 1.0 CB A:ASP922 3.8 99.4 1.0 HB3 A:ASP922 4.1 0.3 1.0 HB2 A:ASP922 4.2 0.3 1.0 HA A:ASP922 4.4 98.0 1.0 N A:ASP923 4.4 92.7 1.0 HB2 A:ASP923 4.5 0.1 1.0 CA A:ASP922 4.6 81.7 1.0

T.Pavkov-Keller, A.Dordic, M.Eder, E.M.Egelseer, K.Davis, D.Mills, U.B.Sleytr, W.Kuehlbrandt, J.Vonck, W.Keller. Structure of Surface Layer Protein Sbsc To Be Published.