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Zinc in PDB 5cw6: Structure of Metal Dependent Enzyme DRBRCC36

Protein crystallography data

The structure of Structure of Metal Dependent Enzyme DRBRCC36, PDB code: 5cw6 was solved by E.Zeqiraj, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.13 / 3.19
Space group P 62 2 2
Cell size a, b, c (Å), α, β, γ (°) 108.833, 108.833, 137.439, 90.00, 90.00, 120.00
R / Rfree (%) 21.4 / 24.1

Zinc Binding Sites:

The binding sites of Zinc atom in the Structure of Metal Dependent Enzyme DRBRCC36 (pdb code 5cw6). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Structure of Metal Dependent Enzyme DRBRCC36, PDB code: 5cw6:

Zinc binding site 1 out of 1 in 5cw6

Go back to Zinc Binding Sites List in 5cw6
Zinc binding site 1 out of 1 in the Structure of Metal Dependent Enzyme DRBRCC36


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of Metal Dependent Enzyme DRBRCC36 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1001

b:78.9
occ:1.00
OD2 A:ASP105 2.1 55.7 1.0
NE2 A:HIS94 2.1 65.6 1.0
NE2 A:HIS92 2.6 63.2 1.0
O A:HOH1101 2.7 34.7 1.0
CG A:ASP105 2.8 69.6 1.0
OD1 A:ASP105 2.9 85.0 1.0
CD2 A:HIS92 3.0 66.1 1.0
CD2 A:HIS94 3.1 60.6 1.0
CE1 A:HIS94 3.1 63.5 1.0
OG A:SER102 3.4 70.4 1.0
CE1 A:HIS92 3.6 80.2 1.0
CG A:HIS92 4.2 64.1 1.0
ND1 A:HIS94 4.2 58.7 1.0
CG A:HIS94 4.2 54.6 1.0
CB A:ASP105 4.3 65.6 1.0
CB A:SER102 4.3 72.4 1.0
ND1 A:HIS92 4.5 76.5 1.0
N A:SER102 4.5 52.6 1.0
CD1 A:ILE97 4.6 65.0 1.0
CD1 A:ILE123 4.8 48.0 1.0

Reference:

E.Zeqiraj, L.Tian, C.A.Piggott, M.C.Pillon, N.M.Duffy, D.F.Ceccarelli, A.F.Keszei, K.Lorenzen, I.Kurinov, S.Orlicky, G.D.Gish, A.J.Heck, A.Guarne, R.A.Greenberg, F.Sicheri. Higher-Order Assembly of BRCC36-KIAA0157 Is Required For Dub Activity and Biological Function. Mol.Cell V. 59 970 2015.
ISSN: ISSN 1097-2765
PubMed: 26344097
DOI: 10.1016/J.MOLCEL.2015.07.028
Page generated: Wed Dec 16 06:07:34 2020

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