Atomistry » Zinc » PDB 5cvi-5d7w » 5cw3
Atomistry »
  Zinc »
    PDB 5cvi-5d7w »
      5cw3 »

Zinc in PDB 5cw3: Structure of CFBRCC36-CFKIAA0157 Complex (Zn Edge)

Protein crystallography data

The structure of Structure of CFBRCC36-CFKIAA0157 Complex (Zn Edge), PDB code: 5cw3 was solved by E.Zeqiraj, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.76 / 2.55
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 49.930, 116.580, 226.080, 90.00, 90.00, 90.00
R / Rfree (%) 21.1 / 25.8

Zinc Binding Sites:

The binding sites of Zinc atom in the Structure of CFBRCC36-CFKIAA0157 Complex (Zn Edge) (pdb code 5cw3). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Structure of CFBRCC36-CFKIAA0157 Complex (Zn Edge), PDB code: 5cw3:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 5cw3

Go back to Zinc Binding Sites List in 5cw3
Zinc binding site 1 out of 2 in the Structure of CFBRCC36-CFKIAA0157 Complex (Zn Edge)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of CFBRCC36-CFKIAA0157 Complex (Zn Edge) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn301

b:77.9
occ:1.00
OD2 A:ASP107 2.0 66.5 1.0
NE2 A:HIS96 2.2 53.8 1.0
NE2 A:HIS94 2.4 47.4 1.0
CG A:ASP107 2.8 69.2 1.0
OD1 A:ASP107 3.0 80.9 1.0
CD2 A:HIS94 3.0 40.6 1.0
CD2 A:HIS96 3.1 52.8 1.0
CE1 A:HIS96 3.2 55.3 1.0
CE1 A:HIS94 3.6 53.6 1.0
OG A:SER104 4.1 50.3 1.0
CG A:HIS94 4.3 42.2 1.0
CG A:HIS96 4.3 54.4 1.0
CB A:ASP107 4.3 57.4 1.0
ND1 A:HIS96 4.3 63.7 1.0
OD1 A:ASP60 4.3 0.6 1.0
OE2 A:GLU30 4.3 69.6 1.0
ND1 A:HIS94 4.5 45.8 1.0
N A:SER104 4.9 47.4 1.0
CG2 A:VAL62 4.9 57.5 1.0
CD1 A:ILE125 4.9 49.1 1.0
CB A:SER104 4.9 61.2 1.0
O A:SER95 5.0 47.0 1.0

Zinc binding site 2 out of 2 in 5cw3

Go back to Zinc Binding Sites List in 5cw3
Zinc binding site 2 out of 2 in the Structure of CFBRCC36-CFKIAA0157 Complex (Zn Edge)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Structure of CFBRCC36-CFKIAA0157 Complex (Zn Edge) within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Zn301

b:0.1
occ:1.00
NE2 C:HIS96 2.2 90.1 1.0
NE2 C:HIS94 2.4 75.4 1.0
OD1 C:ASP107 2.5 0.2 1.0
OD2 C:ASP107 2.6 0.5 1.0
CG C:ASP107 2.9 0.6 1.0
CD2 C:HIS94 3.0 65.2 1.0
CD2 C:HIS96 3.2 83.4 1.0
CE1 C:HIS96 3.2 88.3 1.0
OE2 C:GLU30 3.2 0.3 1.0
CE1 C:HIS94 3.5 87.2 1.0
OG C:SER104 3.9 99.1 1.0
CG C:HIS94 4.3 70.1 1.0
ND1 C:HIS96 4.3 82.2 1.0
CG C:HIS96 4.3 80.0 1.0
CB C:ASP107 4.4 0.7 1.0
CD C:GLU30 4.4 0.7 1.0
ND1 C:HIS94 4.5 82.0 1.0
CB C:SER104 4.9 0.8 1.0
N C:SER104 4.9 0.3 1.0
OE1 C:GLU30 5.0 0.2 1.0

Reference:

E.Zeqiraj, L.Tian, C.A.Piggott, M.C.Pillon, N.M.Duffy, D.F.Ceccarelli, A.F.Keszei, K.Lorenzen, I.Kurinov, S.Orlicky, G.D.Gish, A.J.Heck, A.Guarne, R.A.Greenberg, F.Sicheri. Higher-Order Assembly of BRCC36-KIAA0157 Is Required For Dub Activity and Biological Function. Mol.Cell V. 59 970 2015.
ISSN: ISSN 1097-2765
PubMed: 26344097
DOI: 10.1016/J.MOLCEL.2015.07.028
Page generated: Sun Oct 27 14:29:41 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy