Zinc in PDB 5c6q: Crystal Structure of the Apo Topless Related Protein 2 (TPR2) N- Terminal Domain (1-209) From Rice

The structure of Crystal Structure of the Apo Topless Related Protein 2 (TPR2) N- Terminal Domain (1-209) From Rice, PDB code: 5c6q was solved by J.Ke, H.Ma, X.Gu, J.S.Brunzelle, H.E.Xu, K.Melcher, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	34.71 / 3.25
Space group	P 42 21 2
Cell size a, b, c (Å), α, β, γ (°)	58.971, 58.971, 171.743, 90.00, 90.00, 90.00
R / Rfree (%)	21.3 / 27

The binding sites of Zinc atom in the Crystal Structure of the Apo Topless Related Protein 2 (TPR2) N- Terminal Domain (1-209) From Rice (pdb code 5c6q). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of the Apo Topless Related Protein 2 (TPR2) N- Terminal Domain (1-209) From Rice, PDB code: 5c6q:

Zinc binding site 1 out of 1 in the Crystal Structure of the Apo Topless Related Protein 2 (TPR2) N- Terminal Domain (1-209) From Rice


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of the Apo Topless Related Protein 2 (TPR2) N- Terminal Domain (1-209) From Rice within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn401 b:0.5 occ:0.50 ND1 A:HIS183 1.9 0.6 1.0 SG A:CYS186 2.1 0.8 1.0 NE2 A:HIS202 2.2 0.2 1.0 SG A:CYS204 2.3 0.7 1.0 CE1 A:HIS183 2.8 0.7 1.0 CB A:CYS186 2.8 0.1 1.0 CG A:HIS183 2.9 0.2 1.0 CE1 A:HIS202 3.0 0.8 1.0 CD2 A:HIS202 3.3 0.4 1.0 CB A:HIS183 3.3 0.5 1.0 CA A:HIS183 3.3 0.1 1.0 CB A:CYS204 3.4 0.8 1.0 O A:HIS183 3.5 0.6 1.0 NE2 A:HIS183 3.9 1.0 1.0 C A:HIS183 3.9 0.9 1.0 N A:CYS204 3.9 0.1 1.0 CG A:PRO193 3.9 0.6 1.0 CD2 A:HIS183 3.9 0.3 1.0 ND1 A:HIS202 4.2 0.6 1.0 CA A:CYS204 4.2 0.3 1.0 CA A:CYS186 4.3 0.0 1.0 C A:THR203 4.3 0.6 1.0 CG A:HIS202 4.4 0.4 1.0 N A:HIS183 4.6 0.8 1.0 CB A:PRO193 4.6 0.5 1.0 N A:CYS186 4.7 0.3 1.0 O A:THR203 4.7 0.6 1.0 CA A:THR203 4.8 0.3 1.0 CB A:PRO189 4.9 0.7 1.0 O A:GLN182 4.9 0.8 1.0 CD A:PRO193 4.9 0.1 1.0

J.Ke, H.Ma, X.Gu, A.Thelen, J.S.Brunzelle, J.Li, H.E.Xu, K.Melcher. Structural Basis For Recognition of Diverse Transcriptional Repressors By the Topless Family of Corepressors. Sci Adv V. 1 00107 2015.
ISSN: ESSN 2375-2548
PubMed: 26601214
DOI: 10.1126/SCIADV.1500107