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Zinc in PDB 5b60: Crystal Structure of PTLCIB4 S47R Mutant, A Homolog of the Limiting CO2-Inducible Protein Lcib

Protein crystallography data

The structure of Crystal Structure of PTLCIB4 S47R Mutant, A Homolog of the Limiting CO2-Inducible Protein Lcib, PDB code: 5b60 was solved by S.Jin, J.Sun, T.Wunder, D.Tang, O.M.Mueller-Caja, Y.Gao, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.16 / 2.20
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 68.550, 66.110, 69.060, 90.00, 101.00, 90.00
R / Rfree (%) 25 / 25.4

Other elements in 5b60:

The structure of Crystal Structure of PTLCIB4 S47R Mutant, A Homolog of the Limiting CO2-Inducible Protein Lcib also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of PTLCIB4 S47R Mutant, A Homolog of the Limiting CO2-Inducible Protein Lcib (pdb code 5b60). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of PTLCIB4 S47R Mutant, A Homolog of the Limiting CO2-Inducible Protein Lcib, PDB code: 5b60:

Zinc binding site 1 out of 1 in 5b60

Go back to Zinc Binding Sites List in 5b60
Zinc binding site 1 out of 1 in the Crystal Structure of PTLCIB4 S47R Mutant, A Homolog of the Limiting CO2-Inducible Protein Lcib


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of PTLCIB4 S47R Mutant, A Homolog of the Limiting CO2-Inducible Protein Lcib within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn301

b:42.9
occ:1.00
NE2 A:HIS102 2.1 38.1 1.0
O A:HOH419 2.2 36.7 1.0
SG A:CYS126 2.2 44.7 1.0
SG A:CYS46 2.4 45.5 1.0
CD2 A:HIS102 3.0 36.9 1.0
CE1 A:HIS102 3.1 41.1 1.0
CB A:CYS46 3.2 40.6 1.0
CB A:CYS126 3.2 34.8 1.0
CA A:CYS126 3.6 41.3 1.0
CB A:ASP48 4.1 46.8 1.0
N A:GLY127 4.1 46.1 1.0
ND1 A:HIS102 4.2 43.7 1.0
CG A:HIS102 4.2 42.0 1.0
C A:CYS126 4.2 44.6 1.0
O A:HOH413 4.3 38.1 1.0
CA A:CYS46 4.6 42.1 1.0
CA A:ALA72 4.7 38.9 1.0
N A:SER128 4.7 42.8 1.0
N A:CYS126 4.8 52.1 1.0
CG A:ASP48 4.9 52.0 1.0
N A:ALA72 4.9 37.4 1.0
N A:ASP48 4.9 48.0 1.0
OD2 A:ASP48 5.0 63.9 1.0

Reference:

S.Jin, J.Sun, T.Wunder, D.Tang, A.B.Cousins, S.K.Sze, O.Mueller-Cajar, Y.G.Gao. Structural Insights Into the Lcib Protein Family Reveals A New Group of Beta-Carbonic Anhydrases Proc. Natl. Acad. Sci. V. 113 14716 2016U.S.A..
ISSN: ESSN 1091-6490
PubMed: 27911826
DOI: 10.1073/PNAS.1616294113
Page generated: Sun Oct 27 13:23:34 2024

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