Zinc in PDB 5aas: The Selective Autophagy Receptor TAX1BP1 Is Required For Autophagy- Dependent Capture of Cytosolic Salmonella Typhimurium
Zinc Binding Sites:
The binding sites of Zinc atom in the The Selective Autophagy Receptor TAX1BP1 Is Required For Autophagy- Dependent Capture of Cytosolic Salmonella Typhimurium
(pdb code 5aas). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the
The Selective Autophagy Receptor TAX1BP1 Is Required For Autophagy- Dependent Capture of Cytosolic Salmonella Typhimurium, PDB code: 5aas:
Jump to Zinc binding site number:
1;
2;
Zinc binding site 1 out
of 2 in 5aas
Go back to
Zinc Binding Sites List in 5aas
Zinc binding site 1 out
of 2 in the The Selective Autophagy Receptor TAX1BP1 Is Required For Autophagy- Dependent Capture of Cytosolic Salmonella Typhimurium
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of The Selective Autophagy Receptor TAX1BP1 Is Required For Autophagy- Dependent Capture of Cytosolic Salmonella Typhimurium within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn785
b:0.0
occ:1.00
|
NE2
|
A:HIS753
|
2.0
|
0.0
|
1.0
|
NE2
|
A:HIS749
|
2.0
|
0.0
|
1.0
|
SG
|
A:CYS730
|
2.2
|
0.0
|
1.0
|
HB3
|
A:CYS730
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS733
|
2.3
|
0.0
|
1.0
|
CE1
|
A:HIS749
|
2.7
|
0.0
|
1.0
|
CB
|
A:CYS730
|
2.7
|
0.0
|
1.0
|
CE1
|
A:HIS753
|
2.8
|
0.0
|
1.0
|
CD2
|
A:HIS753
|
2.9
|
0.0
|
1.0
|
HE1
|
A:HIS749
|
2.9
|
0.0
|
1.0
|
CD2
|
A:HIS749
|
2.9
|
0.0
|
1.0
|
HB2
|
A:CYS730
|
3.1
|
0.0
|
1.0
|
HB2
|
A:LEU732
|
3.1
|
0.0
|
1.0
|
HE1
|
A:HIS753
|
3.2
|
0.0
|
1.0
|
HD2
|
A:HIS753
|
3.2
|
0.0
|
1.0
|
HB3
|
A:CYS733
|
3.2
|
0.0
|
1.0
|
HD2
|
A:HIS749
|
3.4
|
0.0
|
1.0
|
CB
|
A:CYS733
|
3.4
|
0.0
|
1.0
|
H
|
A:CYS733
|
3.4
|
0.0
|
1.0
|
HA
|
A:VAL750
|
3.7
|
0.0
|
1.0
|
ND1
|
A:HIS749
|
3.7
|
0.0
|
1.0
|
N
|
A:CYS733
|
3.7
|
0.0
|
1.0
|
ND1
|
A:HIS753
|
3.8
|
0.0
|
1.0
|
CG
|
A:HIS749
|
3.8
|
0.0
|
1.0
|
CG
|
A:HIS753
|
3.8
|
0.0
|
1.0
|
HD11
|
A:LEU732
|
4.0
|
0.0
|
1.0
|
CA
|
A:CYS730
|
4.1
|
0.0
|
1.0
|
CA
|
A:CYS733
|
4.1
|
0.0
|
1.0
|
CB
|
A:LEU732
|
4.2
|
0.0
|
1.0
|
H
|
A:LEU732
|
4.2
|
0.0
|
1.0
|
HB2
|
A:CYS733
|
4.3
|
0.0
|
1.0
|
O
|
A:CYS730
|
4.3
|
0.0
|
1.0
|
C
|
A:LEU732
|
4.3
|
0.0
|
1.0
|
O
|
A:HIS749
|
4.4
|
0.0
|
1.0
|
C
|
A:CYS730
|
4.4
|
0.0
|
1.0
|
HD1
|
A:HIS749
|
4.5
|
0.0
|
1.0
|
HB3
|
A:LEU732
|
4.5
|
0.0
|
1.0
|
CA
|
A:LEU732
|
4.6
|
0.0
|
1.0
|
N
|
A:LEU732
|
4.6
|
0.0
|
1.0
|
CA
|
A:VAL750
|
4.7
|
0.0
|
1.0
|
HD1
|
A:HIS753
|
4.7
|
0.0
|
1.0
|
C
|
A:HIS749
|
4.7
|
0.0
|
1.0
|
H
|
A:CYS730
|
4.7
|
0.0
|
1.0
|
HE2
|
A:PHE737
|
4.7
|
0.0
|
1.0
|
HG21
|
A:VAL750
|
4.7
|
0.0
|
1.0
|
HA
|
A:CYS730
|
4.8
|
0.0
|
1.0
|
HG23
|
A:VAL750
|
4.8
|
0.0
|
1.0
|
HB3
|
A:LEU735
|
4.8
|
0.0
|
1.0
|
N
|
A:VAL750
|
4.8
|
0.0
|
1.0
|
H
|
A:LEU735
|
4.9
|
0.0
|
1.0
|
HZ
|
A:PHE737
|
4.9
|
0.0
|
1.0
|
C
|
A:CYS733
|
4.9
|
0.0
|
1.0
|
N
|
A:CYS730
|
4.9
|
0.0
|
1.0
|
HE1
|
A:PHE746
|
5.0
|
0.0
|
1.0
|
CD1
|
A:LEU732
|
5.0
|
0.0
|
1.0
|
|
Zinc binding site 2 out
of 2 in 5aas
Go back to
Zinc Binding Sites List in 5aas
Zinc binding site 2 out
of 2 in the The Selective Autophagy Receptor TAX1BP1 Is Required For Autophagy- Dependent Capture of Cytosolic Salmonella Typhimurium
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of The Selective Autophagy Receptor TAX1BP1 Is Required For Autophagy- Dependent Capture of Cytosolic Salmonella Typhimurium within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn786
b:0.0
occ:1.00
|
NE2
|
A:HIS780
|
2.0
|
0.0
|
1.0
|
NE2
|
A:HIS776
|
2.0
|
0.0
|
1.0
|
SG
|
A:CYS757
|
2.2
|
0.0
|
1.0
|
SG
|
A:CYS760
|
2.3
|
0.0
|
1.0
|
CD2
|
A:HIS780
|
2.5
|
0.0
|
1.0
|
HD2
|
A:HIS780
|
2.6
|
0.0
|
1.0
|
HB3
|
A:CYS757
|
2.7
|
0.0
|
1.0
|
CE1
|
A:HIS776
|
2.7
|
0.0
|
1.0
|
CD2
|
A:HIS776
|
2.9
|
0.0
|
1.0
|
CB
|
A:CYS757
|
3.0
|
0.0
|
1.0
|
HE1
|
A:HIS776
|
3.0
|
0.0
|
1.0
|
CE1
|
A:HIS780
|
3.1
|
0.0
|
1.0
|
HB3
|
A:CYS760
|
3.2
|
0.0
|
1.0
|
HB2
|
A:CYS757
|
3.2
|
0.0
|
1.0
|
HD2
|
A:HIS776
|
3.3
|
0.0
|
1.0
|
H
|
A:CYS760
|
3.3
|
0.0
|
1.0
|
CB
|
A:CYS760
|
3.4
|
0.0
|
1.0
|
HB2
|
A:MET759
|
3.4
|
0.0
|
1.0
|
HA
|
A:VAL777
|
3.6
|
0.0
|
1.0
|
HE1
|
A:HIS780
|
3.6
|
0.0
|
1.0
|
CG
|
A:HIS780
|
3.6
|
0.0
|
1.0
|
HB2
|
A:GLU762
|
3.7
|
0.0
|
1.0
|
ND1
|
A:HIS776
|
3.7
|
0.0
|
1.0
|
N
|
A:CYS760
|
3.8
|
0.0
|
1.0
|
CG
|
A:HIS776
|
3.8
|
0.0
|
1.0
|
ND1
|
A:HIS780
|
3.9
|
0.0
|
1.0
|
H
|
A:SER761
|
4.1
|
0.0
|
1.0
|
H
|
A:MET759
|
4.1
|
0.0
|
1.0
|
CA
|
A:CYS760
|
4.2
|
0.0
|
1.0
|
H
|
A:GLU762
|
4.2
|
0.0
|
1.0
|
O
|
A:HIS776
|
4.2
|
0.0
|
1.0
|
HB2
|
A:CYS760
|
4.2
|
0.0
|
1.0
|
CA
|
A:CYS757
|
4.4
|
0.0
|
1.0
|
CB
|
A:MET759
|
4.5
|
0.0
|
1.0
|
HD1
|
A:HIS776
|
4.6
|
0.0
|
1.0
|
C
|
A:MET759
|
4.6
|
0.0
|
1.0
|
HE1
|
A:PHE764
|
4.6
|
0.0
|
1.0
|
CA
|
A:VAL777
|
4.6
|
0.0
|
1.0
|
C
|
A:HIS776
|
4.6
|
0.0
|
1.0
|
CB
|
A:GLU762
|
4.7
|
0.0
|
1.0
|
N
|
A:SER761
|
4.7
|
0.0
|
1.0
|
C
|
A:CYS757
|
4.8
|
0.0
|
1.0
|
N
|
A:MET759
|
4.8
|
0.0
|
1.0
|
HD1
|
A:HIS780
|
4.8
|
0.0
|
1.0
|
HZ
|
A:PHE764
|
4.8
|
0.0
|
1.0
|
HB3
|
A:GLU762
|
4.8
|
0.0
|
1.0
|
HG12
|
A:VAL777
|
4.8
|
0.0
|
1.0
|
N
|
A:VAL777
|
4.8
|
0.0
|
1.0
|
HG21
|
A:VAL777
|
4.8
|
0.0
|
1.0
|
HB2
|
A:HIS780
|
4.8
|
0.0
|
1.0
|
CA
|
A:MET759
|
4.8
|
0.0
|
1.0
|
CB
|
A:HIS780
|
4.9
|
0.0
|
1.0
|
HA
|
A:CYS757
|
4.9
|
0.0
|
1.0
|
C
|
A:CYS760
|
4.9
|
0.0
|
1.0
|
HB3
|
A:MET759
|
5.0
|
0.0
|
1.0
|
O
|
A:CYS757
|
5.0
|
0.0
|
1.0
|
N
|
A:GLU762
|
5.0
|
0.0
|
1.0
|
HG11
|
A:VAL777
|
5.0
|
0.0
|
1.0
|
|
Reference:
D.A.Tumbarello,
P.T.Manna,
M.Allen,
M.Bycroft,
S.D.Arden,
J.Kendrick-Jones,
F.Buss.
The Autophagy Receptor TAX1BP1 and the Molecular Motor Myosin VI Are Required For Clearance of Salmonella Typhimurium By Autophagy. Plos Pathog. V. 11 05174 2015.
ISSN: ISSN 1553-7366
PubMed: 26451915
DOI: 10.1371/JOURNAL.PPAT.1005174
Page generated: Sun Oct 27 12:43:58 2024
|