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Zinc in PDB 4ygl: NACLO4--Interactions Between Hofmeister Anions and the Binding Pocket of A Protein

Enzymatic activity of NACLO4--Interactions Between Hofmeister Anions and the Binding Pocket of A Protein

All present enzymatic activity of NACLO4--Interactions Between Hofmeister Anions and the Binding Pocket of A Protein:
4.2.1.1;

Protein crystallography data

The structure of NACLO4--Interactions Between Hofmeister Anions and the Binding Pocket of A Protein, PDB code: 4ygl was solved by J.M.Fox, K.Kang, W.Sherman, A.Heroux, G.M.Sastry, M.Baghbanzadeh, M.R.Lockett, G.M.Whitesides, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.93 / 1.51
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 42.138, 41.040, 72.878, 90.00, 104.45, 90.00
R / Rfree (%) 18.8 / 21.3

Other elements in 4ygl:

The structure of NACLO4--Interactions Between Hofmeister Anions and the Binding Pocket of A Protein also contains other interesting chemical elements:

Chlorine (Cl) 3 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the NACLO4--Interactions Between Hofmeister Anions and the Binding Pocket of A Protein (pdb code 4ygl). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the NACLO4--Interactions Between Hofmeister Anions and the Binding Pocket of A Protein, PDB code: 4ygl:

Zinc binding site 1 out of 1 in 4ygl

Go back to Zinc Binding Sites List in 4ygl
Zinc binding site 1 out of 1 in the NACLO4--Interactions Between Hofmeister Anions and the Binding Pocket of A Protein


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of NACLO4--Interactions Between Hofmeister Anions and the Binding Pocket of A Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn301

b:5.3
occ:1.00
 ND1 A:HIS119 2.0 5.0 1.0
NE2 A:HIS94 2.0 6.1 1.0
O A:OH302 2.0 7.0 1.0
NE2 A:HIS96 2.1 6.1 1.0
O4 A:LCP303 2.8 9.8 1.0
CE1 A:HIS119 2.9 4.7 1.0
CD2 A:HIS94 3.0 5.8 1.0
CE1 A:HIS96 3.0 6.0 1.0
CD2 A:HIS96 3.1 6.1 1.0
CG A:HIS119 3.1 4.4 1.0
CE1 A:HIS94 3.1 6.1 1.0
CB A:HIS119 3.5 4.5 1.0
OG1 A:THR199 3.7 5.8 1.0
O A:HOH519 3.9 9.8 1.0
CL A:LCP303 4.0 9.6 1.0
OE1 A:GLU106 4.0 5.2 1.0
NE2 A:HIS119 4.0 4.8 1.0
O1 A:LCP303 4.1 12.8 1.0
CG A:HIS94 4.1 5.3 1.0
CD2 A:HIS119 4.1 5.2 1.0
ND1 A:HIS94 4.2 5.7 1.0
ND1 A:HIS96 4.2 5.7 1.0
CG A:HIS96 4.2 6.0 1.0
CD A:GLU106 4.9 5.1 1.0
O A:HOH596 4.9 18.4 1.0
O2 A:LCP303 5.0 16.0 1.0
CA A:HIS119 5.0 4.6 1.0
O3 A:LCP303 5.0 13.6 1.0

Reference:

J.M.Fox, K.Kang, W.Sherman, A.Heroux, M.Sastry, M.Baghbanzadeh, M.R.Lockett, G.M.Whitesides. Interactions Between Hofmeister Anions and the Binding Pocket of A Protein. J.Am.Chem.Soc. 2015.
ISSN: ESSN 1520-5126
PubMed: 25738615
DOI: 10.1021/JACS.5B00187
Page generated: Sun Oct 27 11:14:18 2024

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