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Zinc in PDB 4wou: Crystal Structure of Mtb Pepck in Complex with Gdp and Metals

Enzymatic activity of Crystal Structure of Mtb Pepck in Complex with Gdp and Metals

All present enzymatic activity of Crystal Structure of Mtb Pepck in Complex with Gdp and Metals:
4.1.1.32;

Protein crystallography data

The structure of Crystal Structure of Mtb Pepck in Complex with Gdp and Metals, PDB code: 4wou was solved by H.L.Kim, J.C.Sacchettini, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.58 / 2.12
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 103.316, 125.172, 122.147, 90.00, 90.00, 90.00
R / Rfree (%) 17.7 / 21.1

Other elements in 4wou:

The structure of Crystal Structure of Mtb Pepck in Complex with Gdp and Metals also contains other interesting chemical elements:

Manganese (Mn) 1 atom

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Mtb Pepck in Complex with Gdp and Metals (pdb code 4wou). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Mtb Pepck in Complex with Gdp and Metals, PDB code: 4wou:

Zinc binding site 1 out of 1 in 4wou

Go back to Zinc Binding Sites List in 4wou
Zinc binding site 1 out of 1 in the Crystal Structure of Mtb Pepck in Complex with Gdp and Metals


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Mtb Pepck in Complex with Gdp and Metals within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn704

b:32.8
occ:1.00
OD1 A:ASP296 2.2 36.1 1.0
O A:HOH1108 2.3 43.8 1.0
O A:HOH1107 2.3 37.4 1.0
O A:HOH1111 2.3 45.4 1.0
NE2 A:HIS249 2.3 35.9 1.0
NZ A:LYS229 2.4 36.5 1.0
CG A:ASP296 3.1 37.2 1.0
CE1 A:HIS249 3.2 36.5 1.0
CD2 A:HIS249 3.4 33.7 1.0
OD2 A:ASP296 3.4 32.1 1.0
CE A:LYS229 3.4 35.8 1.0
O A:HOH1113 4.0 48.2 1.0
NZ A:LYS275 4.0 34.3 1.0
ND1 A:HIS249 4.3 30.9 1.0
CG A:HIS249 4.4 31.8 1.0
CB A:ASP296 4.5 32.3 1.0
O4 A:PO4705 4.6 43.2 0.7
O A:HOH1115 4.6 37.8 1.0
O A:HOH1114 4.6 50.4 1.0
O A:HOH1022 4.7 33.8 1.0
O1 A:PO4705 4.7 42.6 0.7
CD A:LYS229 4.8 33.0 1.0
CE2 A:PHE469 4.8 32.4 1.0
O A:HOH834 4.8 44.0 1.0
CZ A:PHE469 4.8 33.3 1.0
O A:HOH872 4.9 33.5 1.0

Reference:

H.L.Kim, I.V.Kriger, J.C.Sacchettini. Crystal Structure of Mtb Pepck in Complex with Gdp and Metals To Be Published.
Page generated: Wed Dec 16 05:51:24 2020

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