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Zinc in PDB 4i35: The Crystal Structure of Serralysin

Protein crystallography data

The structure of The Crystal Structure of Serralysin, PDB code: 4i35 was solved by M.Zou, T.Ran, D.Xu, W.Wang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.78 / 1.50
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 42.357, 105.075, 151.114, 90.00, 90.00, 90.00
R / Rfree (%) 14.8 / 16.5

Other elements in 4i35:

The structure of The Crystal Structure of Serralysin also contains other interesting chemical elements:

Calcium (Ca) 7 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the The Crystal Structure of Serralysin (pdb code 4i35). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the The Crystal Structure of Serralysin, PDB code: 4i35:

Zinc binding site 1 out of 1 in 4i35

Go back to Zinc Binding Sites List in 4i35
Zinc binding site 1 out of 1 in the The Crystal Structure of Serralysin


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of The Crystal Structure of Serralysin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn510

b:9.8
occ:0.84
NE2 A:HIS186 1.9 10.1 1.0
NE2 A:HIS176 2.0 9.7 1.0
O A:HOH1024 2.1 12.5 1.0
NE2 A:HIS180 2.1 10.8 1.0
OH A:TYR216 2.5 17.9 1.0
CD2 A:HIS186 2.9 14.4 1.0
CE1 A:HIS186 2.9 14.9 1.0
CD2 A:HIS176 3.0 9.3 1.0
CE1 A:HIS176 3.0 14.3 1.0
CD2 A:HIS180 3.1 9.8 1.0
CE1 A:HIS180 3.1 12.1 1.0
CZ A:TYR216 3.5 14.8 1.0
OE2 A:GLU177 3.8 13.6 1.0
CE2 A:TYR216 4.0 16.2 1.0
ND1 A:HIS186 4.0 15.4 1.0
O A:HOH1025 4.0 15.4 1.0
CG A:HIS186 4.0 13.2 1.0
ND1 A:HIS176 4.1 11.2 1.0
CG A:HIS176 4.2 11.1 1.0
ND1 A:HIS180 4.2 11.7 1.0
CG A:HIS180 4.2 10.4 1.0
O A:HOH1118 4.3 19.8 1.0
OE1 A:GLU177 4.4 12.8 1.0
CD A:GLU177 4.4 10.9 1.0
CE1 A:TYR216 4.6 19.3 1.0
CE A:MET214 4.8 11.7 1.0
O A:HOH752 4.9 28.7 1.0

Reference:

W.Wang, D.Xu, M.Zou, T.Ran. The Crystal Structure of Serralysin To Be Published.
Page generated: Wed Dec 16 05:23:20 2020

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