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Zinc in PDB 4fu5: Carbonic Anhydrase II in Complex with N-[(2Z)-1,3-Oxazolidin-2- Ylidene]Sulfuric Diamide

Enzymatic activity of Carbonic Anhydrase II in Complex with N-[(2Z)-1,3-Oxazolidin-2- Ylidene]Sulfuric Diamide

All present enzymatic activity of Carbonic Anhydrase II in Complex with N-[(2Z)-1,3-Oxazolidin-2- Ylidene]Sulfuric Diamide:
4.2.1.1;

Protein crystallography data

The structure of Carbonic Anhydrase II in Complex with N-[(2Z)-1,3-Oxazolidin-2- Ylidene]Sulfuric Diamide, PDB code: 4fu5 was solved by A.Di Pizio, A.Heine, G.Klebe, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 0.98
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 42.183, 41.532, 72.172, 90.00, 104.23, 90.00
R / Rfree (%) 12.4 / 15

Other elements in 4fu5:

The structure of Carbonic Anhydrase II in Complex with N-[(2Z)-1,3-Oxazolidin-2- Ylidene]Sulfuric Diamide also contains other interesting chemical elements:

Mercury (Hg) 2 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Carbonic Anhydrase II in Complex with N-[(2Z)-1,3-Oxazolidin-2- Ylidene]Sulfuric Diamide (pdb code 4fu5). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Carbonic Anhydrase II in Complex with N-[(2Z)-1,3-Oxazolidin-2- Ylidene]Sulfuric Diamide, PDB code: 4fu5:

Zinc binding site 1 out of 1 in 4fu5

Go back to Zinc Binding Sites List in 4fu5
Zinc binding site 1 out of 1 in the Carbonic Anhydrase II in Complex with N-[(2Z)-1,3-Oxazolidin-2- Ylidene]Sulfuric Diamide


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Carbonic Anhydrase II in Complex with N-[(2Z)-1,3-Oxazolidin-2- Ylidene]Sulfuric Diamide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn302

b:4.0
occ:1.00
 N8 A:0VX303 1.9 3.9 0.8
NE2 A:HIS94 2.0 4.2 1.0
NE2 A:HIS96 2.0 4.0 1.0
ND1 A:HIS119 2.0 3.8 1.0
CE1 A:HIS119 2.9 3.9 1.0
CD2 A:HIS94 3.0 4.6 1.0
CD2 A:HIS96 3.0 4.0 1.0
CE1 A:HIS94 3.0 4.5 1.0
CE1 A:HIS96 3.0 5.5 1.0
S7 A:0VX303 3.1 6.7 0.8
O9 A:0VX303 3.1 6.5 0.8
CG A:HIS119 3.1 3.7 1.0
CB A:HIS119 3.6 3.6 1.0
O A:HOH629 3.7 22.3 1.0
OG1 A:THR199 3.9 4.4 1.0
OE1 A:GLU106 4.0 4.5 1.0
O10 A:0VX303 4.1 11.8 0.8
NE2 A:HIS119 4.1 4.0 1.0
N3 A:0VX303 4.1 15.1 0.8
ND1 A:HIS96 4.1 5.5 1.0
CG A:HIS94 4.2 4.5 1.0
CG A:HIS96 4.2 4.4 1.0
ND1 A:HIS94 4.2 4.7 1.0
CD2 A:HIS119 4.2 3.9 1.0
CD A:GLU106 4.9 4.2 1.0
C2 A:0VX303 5.0 10.8 0.8

Reference:

A.Di Pizio, J.Schulze Wischeler, M.Haake, A.Heine, C.Supuran, G.Klebe. High Resolution Crystal Structures of Carbonic Anhzdrase II in Complex with Nonvel Sulfamide Binders To Be Published.
Page generated: Wed Dec 16 05:18:07 2020

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