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Zinc in PDB 4cj1: Crystal Structure of Celd in Complex with Affitin H3

Enzymatic activity of Crystal Structure of Celd in Complex with Affitin H3

All present enzymatic activity of Crystal Structure of Celd in Complex with Affitin H3:
3.2.1.4;

Protein crystallography data

The structure of Crystal Structure of Celd in Complex with Affitin H3, PDB code: 4cj1 was solved by A.Correa, S.Pacheco, A.E.Mechaly, G.Obal, G.Behar, B.Mouratou, P.Oppezzo, P.M.Alzari, F.Pecorari, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.83 / 1.63
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 74.422, 97.736, 106.580, 90.00, 90.00, 90.00
R / Rfree (%) 10.608 / 14.374

Other elements in 4cj1:

The structure of Crystal Structure of Celd in Complex with Affitin H3 also contains other interesting chemical elements:

Calcium (Ca) 3 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Celd in Complex with Affitin H3 (pdb code 4cj1). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Celd in Complex with Affitin H3, PDB code: 4cj1:

Zinc binding site 1 out of 1 in 4cj1

Go back to Zinc Binding Sites List in 4cj1
Zinc binding site 1 out of 1 in the Crystal Structure of Celd in Complex with Affitin H3


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Celd in Complex with Affitin H3 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1578

b:10.6
occ:1.00
ND1 A:HIS174 2.1 9.7 1.0
NE2 A:HIS197 2.2 9.1 1.0
SG A:CYS155 2.3 10.2 1.0
SG A:CYS173 2.3 11.2 1.0
CE1 A:HIS174 3.0 10.8 1.0
CE1 A:HIS197 3.1 8.9 1.0
CG A:HIS174 3.1 10.5 1.0
CD2 A:HIS197 3.2 9.3 1.0
CB A:CYS155 3.3 8.7 1.0
CB A:CYS173 3.3 10.4 1.0
CA A:CYS155 3.5 9.7 1.0
CB A:HIS174 3.5 9.2 1.0
C A:CYS173 3.8 12.2 1.0
O A:CYS173 3.8 10.4 1.0
N A:GLY156 3.9 10.1 1.0
NE2 A:HIS174 4.1 9.9 1.0
CA A:CYS173 4.2 10.9 1.0
N A:HIS174 4.2 10.8 1.0
ND1 A:HIS197 4.2 10.2 1.0
C A:CYS155 4.2 10.1 1.0
CD2 A:HIS174 4.2 10.6 1.0
CG A:HIS197 4.3 8.9 1.0
CB A:PRO282 4.4 9.9 1.0
NH2 A:ARG289 4.4 11.4 1.0
CA A:HIS174 4.5 9.7 1.0
N A:CYS155 4.7 8.9 1.0
O A:HOH2222 4.9 10.4 1.0
CB A:TYR202 4.9 9.0 1.0
O A:ARG154 4.9 9.9 1.0
CZ A:ARG289 4.9 11.2 1.0
NH1 A:ARG289 4.9 11.7 1.0
O A:TYR202 5.0 9.3 1.0

Reference:

A.Correa, S.Pacheco, A.E.Mechaly, G.Obal, G.Behar, B.Mouratou, P.Oppezzo, P.M.Alzari, F.Pecorari. Potent and Specific Inhibition of Glycosidases By Small Artificial Binding Proteins (Affitins) Plos One V. 9 97438 2014.
ISSN: ISSN 1932-6203
PubMed: 24823716
DOI: 10.1371/JOURNAL.PONE.0097438
Page generated: Wed Dec 16 05:08:41 2020

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