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Zinc in PDB 4c24: L-Fuculose 1-Phosphate Aldolase

Enzymatic activity of L-Fuculose 1-Phosphate Aldolase

All present enzymatic activity of L-Fuculose 1-Phosphate Aldolase:
4.1.2.17;

Protein crystallography data

The structure of L-Fuculose 1-Phosphate Aldolase, PDB code: 4c24 was solved by M.A.Higgins, M.D.L.Suits, C.Marsters, A.B.Boraston, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.72 / 1.50
Space group I 4
Cell size a, b, c (Å), α, β, γ (°) 112.970, 112.970, 40.905, 90.00, 90.00, 90.00
R / Rfree (%) 13.952 / 16.066

Other elements in 4c24:

The structure of L-Fuculose 1-Phosphate Aldolase also contains other interesting chemical elements:

Nickel (Ni) 1 atom

Zinc Binding Sites:

The binding sites of Zinc atom in the L-Fuculose 1-Phosphate Aldolase (pdb code 4c24). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the L-Fuculose 1-Phosphate Aldolase, PDB code: 4c24:

Zinc binding site 1 out of 1 in 4c24

Go back to Zinc Binding Sites List in 4c24
Zinc binding site 1 out of 1 in the L-Fuculose 1-Phosphate Aldolase


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of L-Fuculose 1-Phosphate Aldolase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn301

b:15.8
occ:1.00
NE2 A:HIS93 2.0 12.9 1.0
NE2 A:HIS95 2.0 14.3 1.0
NE2 A:HIS155 2.0 11.7 1.0
O A:HOH2018 2.1 25.1 1.0
O A:GLY25 2.6 24.7 1.0
CE1 A:HIS95 2.9 14.4 1.0
CE1 A:HIS93 2.9 14.9 1.0
CD2 A:HIS155 3.0 14.5 1.0
CE1 A:HIS155 3.0 14.8 1.0
CD2 A:HIS93 3.0 13.9 1.0
CD2 A:HIS95 3.0 14.2 1.0
C A:GLY25 3.5 20.8 1.0
CA A:GLY25 3.9 25.3 1.0
OE2 A:GLU74 4.0 20.9 1.0
ND1 A:HIS93 4.1 14.7 1.0
ND1 A:HIS95 4.1 15.2 1.0
ND1 A:HIS155 4.1 13.5 1.0
CG A:HIS155 4.1 13.7 1.0
CG A:HIS93 4.1 15.7 1.0
CG A:HIS95 4.1 14.0 1.0
CG A:GLU74 4.6 17.2 1.0
N A:GLY26 4.7 19.9 1.0
CD A:GLU74 4.8 19.1 1.0

Reference:

M.A.Higgins, M.D.Suits, C.Marsters, A.B.Boraston. Structural and Functional Analysis of Fucose-Processing Enzymes From Streptococcus Pneumoniae. J.Mol.Biol. V. 426 1469 2014.
ISSN: ISSN 0022-2836
PubMed: 24333485
DOI: 10.1016/J.JMB.2013.12.006
Page generated: Sat Oct 26 20:20:07 2024

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