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Zinc in PDB 3t33: Crystal Structure of Arabidopsis GCR2

Protein crystallography data

The structure of Crystal Structure of Arabidopsis GCR2, PDB code: 3t33 was solved by J.-H.Chen, J.Guo, J.-G.Chen, S.K.Nair, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.05 / 2.25
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 100.849, 119.507, 77.239, 90.00, 90.00, 90.00
R / Rfree (%) 19.4 / 25.7

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Arabidopsis GCR2 (pdb code 3t33). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Arabidopsis GCR2, PDB code: 3t33:

Zinc binding site 1 out of 1 in 3t33

Go back to Zinc Binding Sites List in 3t33
Zinc binding site 1 out of 1 in the Crystal Structure of Arabidopsis GCR2


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Arabidopsis GCR2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn411

b:39.2
occ:1.00
ND1 A:HIS329 1.9 30.2 1.0
SG A:CYS283 2.2 35.1 1.0
SG A:CYS328 2.3 34.6 1.0
CE1 A:HIS329 2.5 34.9 1.0
OXT A:ACT412 2.6 44.8 1.0
CB A:CYS283 2.9 31.1 1.0
CB A:CYS328 3.1 33.2 1.0
CG A:HIS329 3.1 33.1 1.0
C A:ACT412 3.3 47.1 1.0
CH3 A:ACT412 3.4 46.5 1.0
C A:CYS328 3.7 32.8 1.0
NE2 A:HIS329 3.7 31.6 1.0
CB A:HIS329 3.8 35.1 1.0
N A:HIS329 3.8 33.9 1.0
CA A:CYS328 3.9 32.4 1.0
O A:CYS328 4.0 32.6 1.0
CD2 A:HIS329 4.1 32.1 1.0
OH A:TYR76 4.1 32.0 1.0
CA A:CYS283 4.2 32.7 1.0
CA A:HIS329 4.4 34.3 1.0
N A:CYS283 4.5 31.2 1.0
O A:ACT412 4.5 49.1 1.0
O A:HOH462 4.5 41.6 1.0
CD2 A:HIS281 4.8 33.9 1.0

Reference:

J.-H.Chen, J.Guo, J.-G.Chen, S.K.Nair. Crystal Structure of Arabidopsis GCR2 Identifies A Novel Clade of Lantibiotic Cyclase-Like Proteins To Be Published.
Page generated: Wed Dec 16 04:51:20 2020

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