Zinc in PDB 3rsm: Crystal Structure of S108C Mutant of Pmm/Pgm

All present enzymatic activity of Crystal Structure of S108C Mutant of Pmm/Pgm:
5.4.2.2; 5.4.2.8;

The structure of Crystal Structure of S108C Mutant of Pmm/Pgm, PDB code: 3rsm was solved by A.Akella, A.Anbanandam, A.Kelm, Y.Wei, R.Mehra-Chaudhary, L.Beamer, S.Vandoren, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	50.84 / 2.10
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	71.034, 72.806, 92.997, 90.00, 90.00, 90.00
R / Rfree (%)	21.3 / 25.3

The binding sites of Zinc atom in the Crystal Structure of S108C Mutant of Pmm/Pgm (pdb code 3rsm). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of S108C Mutant of Pmm/Pgm, PDB code: 3rsm:

Zinc binding site 1 out of 1 in the Crystal Structure of S108C Mutant of Pmm/Pgm


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of S108C Mutant of Pmm/Pgm within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn500 b:48.6 occ:1.00 OD2 A:ASP242 1.9 40.5 1.0 O2 A:PO4464 1.9 54.7 0.5 OD1 A:ASP246 2.0 36.9 1.0 OD2 A:ASP244 2.1 43.0 1.0 P A:PO4464 2.7 56.3 0.5 O1 A:PO4464 2.9 57.9 0.5 CG A:ASP242 2.9 44.7 1.0 CG A:ASP246 3.0 36.3 1.0 CG A:ASP244 3.0 42.3 1.0 O4 A:PO4464 3.1 56.5 0.5 OD1 A:ASP244 3.2 41.7 1.0 OD2 A:ASP246 3.3 34.9 1.0 OD1 A:ASP242 3.3 43.5 1.0 CG A:ARG247 4.1 40.1 0.5 O3 A:PO4464 4.2 55.5 0.5 CB A:ASP242 4.3 44.2 1.0 CD A:ARG247 4.3 42.3 0.5 NE A:ARG247 4.3 43.4 0.5 N A:ASP246 4.3 37.6 1.0 CB A:ASP246 4.3 36.5 1.0 O A:CYS108 4.4 65.2 1.0 CB A:ASP244 4.5 44.0 1.0 N A:ASP244 4.5 45.1 1.0 CA A:CYS108 4.6 65.9 1.0 N A:ARG247 4.6 38.7 1.0 CA A:ASP246 4.7 36.6 1.0 CD A:ARG247 4.7 42.6 0.5 N A:GLY245 4.8 39.8 1.0 NE2 A:HIS329 4.8 39.2 1.0 C A:ASP246 4.8 37.1 1.0 CB A:ARG247 4.8 39.6 0.5 C A:CYS108 4.8 67.3 1.0 CA A:ASP244 4.9 43.5 1.0 CB A:ARG247 4.9 39.4 0.5 CE A:LYS118 5.0 55.1 1.0 NE A:ARG247 5.0 45.3 0.5 C A:ASP244 5.0 41.0 1.0

A.V.Sarma, A.Anbanandam, A.Kelm, R.Mehra-Chaudhary, Y.Wei, P.Qin, Y.Lee, M.V.Berjanskii, J.A.Mick, L.J.Beamer, S.R.Van Doren. Solution uc(Nmr) of A 463-Residue Phosphohexomutase: Domain 4 Mobility, Substates, and Phosphoryl Transfer Defect. Biochemistry V. 51 807 2012.
ISSN: ISSN 0006-2960
PubMed: 22242625
DOI: 10.1021/BI201609N